RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 INPP4AQ96PE3 977 aaPredicted RBP12.05□□□□□ -0.48
DDB1-221ENST00000543162 ZNF577Q9BSK1 485 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 WDR11Q9BZH6 1224 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 GOLPH3LQ9H4A5 285 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 RNF186Q9NXI6 227 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 SLC5A4Q9NY91 659 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 ASB14A6NK59 587 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 IPO5O00410 1097 aaKnown RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 TNPO2O14787 897 aaKnown RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 GAS7O60861 476 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 HSPA6P17066 643 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 TXLNAP40222 546 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 UBA7P41226 1012 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 NDUFA8P51970 172 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 PDIA5Q14554 519 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 MORN1Q5T089 497 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 SLC5A5Q92911 643 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 EPSTI1Q96J88 318 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 CDHR1Q96JP9 859 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 DIS3Q9Y2L1 958 aaKnown RBP12.04□□□□□ -0.48
DDB1-221ENST00000543162 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 PLXNA1Q9UIW2 1896 aa12.04□□□□□ -0.48
DDB1-221ENST00000543162 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 PP2D1A8MPX8 630 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 MAFGO15525 162 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 NR1I2O75469 434 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 SYKP43405 635 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 FCGRTP55899 365 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
DDB1-221ENST00000543162 MAP2K5Q13163 448 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 KIF22Q14807 665 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 USP49Q70CQ1 688 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
DDB1-221ENST00000543162 MORC4Q8TE76 937 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 SYAP1Q96A49 352 aaPredicted RBP12.03□□□□□ -0.48
DDB1-221ENST00000543162 RIT2Q99578 217 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 PKD2L1Q9P0L9 805 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
DDB1-221ENST00000543162 POTEMA6NI47 508 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 KINO60870 393 aaKnown RBP12.02□□□□□ -0.49
DDB1-221ENST00000543162 PSMD10O75832 226 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 RGS20O76081 388 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 CDC25AP30304 524 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 PSMC4P43686 418 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 SP3Q02447 781 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.49
DDB1-221ENST00000543162 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.49
DDB1-221ENST00000543162 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 ARMCX2Q7L311 632 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 CABP7Q86V35 215 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 RASSF8Q8NHQ8 419 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 CCSER1Q9C0I3 900 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 TBC1D22BQ9NU19 505 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.49
DDB1-221ENST00000543162 TCEAL9Q9UHQ7 104 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 MGAMO43451 1857 aa12.02□□□□□ -0.49
DDB1-221ENST00000543162 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 DOCK3Q8IZD9 2030 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 POLR2DO15514 142 aaKnown RBP12.01□□□□□ -0.49
DDB1-221ENST00000543162 ZNF202O95125 648 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 HOXC6P09630 235 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 ICAM3P32942 547 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 RGS2P41220 211 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 SPIRE1Q08AE8 756 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
DDB1-221ENST00000543162 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 MAMDC4Q6UXC1 1216 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 EEPD1Q7L9B9 569 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 MSL3Q8N5Y2 521 aaKnown RBP12.01□□□□□ -0.49
DDB1-221ENST00000543162 PDILTQ8N807 584 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 ERMNQ8TAM6 284 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 USP6NLQ92738 828 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
DDB1-221ENST00000543162 SDF4Q9BRK5 362 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms