RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
RFC5-209ENST00000543153 FAM8A1Q9UBU6 413 aa12.33□□□□□ -0.44
RFC5-209ENST00000543153 GABRQQ9UN88 632 aa12.33□□□□□ -0.44
RFC5-209ENST00000543153 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.44
RFC5-209ENST00000543153 BRCA2P51587 3418 aa12.33□□□□□ -0.44
RFC5-209ENST00000543153 LILRB5O75023 590 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 BAG3O95817 575 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 HMGCS2P54868 508 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 RHBDL3P58872 404 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 SPP2Q13103 211 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.442e-11■■■■■ 27.7
RFC5-209ENST00000543153 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 FTSJ3Q8IY81 847 aaKnown RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 ASAP3Q8TDY4 903 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 NSUN4Q96CB9 384 aaKnown RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
RFC5-209ENST00000543153 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
RFC5-209ENST00000543153 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 PNMA6EA0A0J9YXQ4 647 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 SHISA8B8ZZ34 492 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 BCAR3O75815 825 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
RFC5-209ENST00000543153 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
RFC5-209ENST00000543153 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
RFC5-209ENST00000543153 VAMP1P23763 118 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 GSTT1P30711 240 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 MCAMP43121 646 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 FXR1P51114 621 aaKnown RBP eCLIP12.31□□□□□ -0.44
RFC5-209ENST00000543153 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
RFC5-209ENST00000543153 TCF12Q99081 682 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 POP1Q99575 1024 aaKnown RBP12.31□□□□□ -0.44
RFC5-209ENST00000543153 AATFQ9NY61 560 aaKnown RBP eCLIP12.31□□□□□ -0.44
RFC5-209ENST00000543153 TNNQ9UQP3 1299 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
RFC5-209ENST00000543153 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 M0R082 166 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 WIPF1O43516 503 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 ALBP02768 609 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 IRX3P78415 501 aaPredicted RBP12.3□□□□□ -0.44
RFC5-209ENST00000543153 FAM110CQ1W6H9 321 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
RFC5-209ENST00000543153 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
RFC5-209ENST00000543153 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
RFC5-209ENST00000543153 COL2A1P02458 1487 aaPredicted RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 CAP2P40123 477 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 GCLCP48506 637 aaPredicted RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 MRPL58Q14197 206 aaKnown RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 GDF6Q6KF10 455 aaPredicted RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 DTHD1Q6ZMT9 781 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 CCAR1Q8IX12 1150 aaKnown RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 TMEM57Q8N5G2 664 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 GLIS3Q8NEA6 775 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 HHIPQ96QV1 700 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
RFC5-209ENST00000543153 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
RFC5-209ENST00000543153 SURF6O75683 361 aaKnown RBP12.28□□□□□ -0.44
RFC5-209ENST00000543153 SGPL1O95470 568 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 HLA-DOAP06340 250 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 ZNF385CQ66K41 422 aaPredicted RBP12.28□□□□□ -0.44
RFC5-209ENST00000543153 BSNDQ8WZ55 320 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
RFC5-209ENST00000543153 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
RFC5-209ENST00000543153 CEP290O15078 2479 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 A0A096LPE4 126 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 IDH1O75874 414 aaKnown RBP12.27□□□□□ -0.45
RFC5-209ENST00000543153 HMGCRP04035 888 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 ASNSP08243 561 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 USP17L7P0C7H9 530 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 KIAA1522Q9P206 1035 aaPredicted RBP12.27□□□□□ -0.45
RFC5-209ENST00000543153 SAP30BPQ9UHR5 308 aaKnown RBP12.27□□□□□ -0.45
RFC5-209ENST00000543153 FLT1P17948 1338 aa12.27□□□□□ -0.45
RFC5-209ENST00000543153 GDF11O95390 407 aa12.26□□□□□ -0.45
RFC5-209ENST00000543153 CDC27P30260 824 aa12.26□□□□□ -0.45
RFC5-209ENST00000543153 GRIA4P48058 902 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms