RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	ERICH6B	Q5W0A0	696 aa		13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	CNKSR3	Q6P9H4	555 aa		13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	DHX38	Q92620	1227 aa	Known RBP	13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	ALG1	Q9BT22	464 aa		13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	IL25	Q9H293	177 aa		13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	RIOX1	Q9H6W3	641 aa		13.77	□□□□□ -0.21
PTPN6-219	ENST00000542848	NLRC5	Q86WI3	1866 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	TLL1	O43897	1013 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	MYCL	P12524	364 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	WDR5	P61964	334 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	GRM4	Q14833	912 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	PGM5	Q15124	567 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	CELF3	Q5SZQ8	465 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	TTC22	Q5TAA0	569 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	MICALL1	Q8N3F8	863 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	RUFY2	Q8WXA3	655 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	ARNTL2	Q8WYA1	636 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	UHRF1	Q96T88	793 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	CERS4	Q9HA82	394 aa		13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848		U3KPZ7	1027 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN6-219	ENST00000542848	ERICH2	A1L162	156 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	EPOP	A6NHQ4	379 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	IFIT3	O14879	490 aa	Known RBP	13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	NBN	O60934	754 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	EFCAB14	O75071	495 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	CYP21A2	P08686	494 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	POLR2M	P0CAP2	368 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	BMP1	P13497	986 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	HOXA13	P31271	388 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	SP2	Q02086	613 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	TRIM71	Q2Q1W2	868 aa	Known RBP	13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	SPATA33	Q96N06	139 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	PIGS	Q96S52	555 aa		13.75	□□□□□ -0.21
PTPN6-219	ENST00000542848	PNMA6F	A0A0J9YX94	578 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	ARHGEF15	O94989	841 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	GGPS1	O95749	300 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	ZNF286B	P0CG31	522 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	GSPT1	P15170	499 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	PDE4A	P27815	886 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	CCND2	P30279	289 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	TROAP	Q12815	778 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	IKBKE	Q14164	716 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	SKIV2L	Q15477	1246 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	SLC35G1	Q2M3R5	365 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	HSDL1	Q3SXM5	330 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	TRAF7	Q6Q0C0	670 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	HOMER1	Q86YM7	354 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	ZBED2	Q9BTP6	218 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	LMCD1	Q9NZU5	365 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	COG5	Q9UP83	839 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	LOXHD1	Q8IVV2	1947 aa		13.74	□□□□□ -0.21
PTPN6-219	ENST00000542848	CYTH3	O43739	400 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	STAM2	O75886	525 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	GJB5	O95377	273 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	UBA1	P22314	1058 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	CHML	P26374	656 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	PTH1R	Q03431	593 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	GRB10	Q13322	594 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	WTAP	Q15007	396 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	SART3	Q15020	963 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	ZNF618	Q5T7W0	954 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	FCHSD1	Q86WN1	690 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	NCOA7	Q8NI08	942 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	IL31RA	Q8NI17	732 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	RAD9A	Q99638	391 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	C16orf70	Q9BSU1	422 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	MLXIP	Q9HAP2	919 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	RALGAPA2	Q2PPJ7	1873 aa		13.73	□□□□□ -0.21
PTPN6-219	ENST00000542848	EMSY	Q7Z589	1322 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848		E7EWF7	191 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	LPXN	O60711	386 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	DEFB103A	P81534	67 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	ZNF200	P98182	395 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	TFF2	Q03403	129 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	HIC1	Q14526	733 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	TCTN1	Q2MV58	587 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	GNPTAB	Q3T906	1256 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	KRT40	Q6A162	431 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	CATIP	Q7Z7H3	387 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	RALYL	Q86SE5	291 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	SERINC5	Q86VE9	423 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	WNT8B	Q93098	351 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	SENP2	Q9HC62	589 aa		13.72	□□□□□ -0.21
PTPN6-219	ENST00000542848	FRMPD4	Q14CM0	1322 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	C17orf102	A2RUQ5	167 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	LCHN	A4D1U4	455 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	RSPH10B2	B2RC85	870 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848		H3BRB1	525 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	SORBS3	O60504	671 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	LGR5	O75473	907 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	RSPH10B	P0C881	870 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	HOXC8	P31273	242 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	ICAM3	P32942	547 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	ERVK-21	P61565	698 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	NEDD9	Q14511	834 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	MBTPS1	Q14703	1052 aa		13.71	□□□□□ -0.21
PTPN6-219	ENST00000542848	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms