RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 NAP1L2Q9ULW6 460 aaPredicted RBP13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 ZNF536O15090 1300 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 STK36Q9NRP7 1315 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 STX6O43752 255 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 SYT1P21579 422 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 SLC1A4P43007 532 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 CPT1AP50416 773 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 CCT2P78371 535 aaKnown RBP13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 TAP1Q03518 808 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 RTN1Q16799 776 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
SRGAP1-205ENST00000542841 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 TRANK1O15050 2925 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 CTDNEP1O95476 244 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 IFNAR1P17181 557 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 PTMSP20962 102 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 PURAQ00577 322 aaKnown RBP13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 GRB10Q13322 594 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 RCSD1Q6JBY9 416 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 MICU3Q86XE3 530 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 WASF1Q92558 559 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 GMCL1Q96IK5 515 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 KAT14Q9H8E8 782 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 C11orf16Q9NQ32 467 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 ATP6V1DQ9Y5K8 247 aa13.3□□□□□ -0.28
SRGAP1-205ENST00000542841 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 MYL3P08590 195 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 KIF5BP33176 963 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 TROAPQ12815 778 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 NTRK3Q16288 839 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 MUM1L1Q5H9M0 696 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 LARP1BQ659C4 914 aaKnown RBP13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 MORC4Q8TE76 937 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 MTG1Q9BT17 334 aaPredicted RBP13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 WDR11Q9BZH6 1224 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
SRGAP1-205ENST00000542841 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 PLA2G6O60733 806 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 BAIAP3O94812 1187 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 ZSCAN22P10073 491 aaPredicted RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 TOP1P11387 765 aaKnown RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 GNAQP50148 359 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 BFSP2Q13515 415 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 NBPF20Q3BBV1 942 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 ADD3Q9UEY8 706 aaKnown RBP13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 ZDHHC9Q9Y397 364 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 MYH15Q9Y2K3 1946 aa13.28□□□□□ -0.28
SRGAP1-205ENST00000542841 JAK2O60674 1132 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 LPXNO60711 386 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 CDC27P30260 824 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 KCNJ6P48051 423 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 SNAP25P60880 206 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 KCTD1Q719H9 257 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 LMCD1Q9NZU5 365 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 MTMR6Q9Y217 621 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
SRGAP1-205ENST00000542841 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 PRR33A8MZF0 331 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 NMT2O60551 498 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 KPNA6O60684 536 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 DEXIO95424 95 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 F13A1P00488 732 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 ICAM1P05362 532 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 SMARCA1P28370 1054 aa13.26□□□□□ -0.29
SRGAP1-205ENST00000542841 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms