RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ABHD16BQ9H3Z7 469 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 VTA1Q9NP79 307 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 KCNMB3Q9NPA1 279 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 KCNH7Q9NS40 1196 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
NPIPB3-210ENST00000542817 CTAGE5O15320 804 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 STAM2O75886 525 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 SMPD1P17405 629 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 IL17AQ16552 155 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 GJC2Q5T442 439 aaPredicted RBP12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 COPS5Q92905 334 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 ARMC5Q96C12 935 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 UIMC1Q96RL1 719 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 AGO4Q9HCK5 861 aaKnown RBP12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
NPIPB3-210ENST00000542817 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 NUCB2P80303 420 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 MTFR1Q15390 333 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 LY6KQ17RY6 165 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 PRR16Q569H4 304 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 RILPL1Q5EBL4 403 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 LHX8Q68G74 356 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 SLC5A5Q92911 643 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
NPIPB3-210ENST00000542817 FIBPO43427 364 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MCM7P33993 719 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MTMR1Q13613 665 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 PLA2G4DQ86XP0 818 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 B4DLN1 442 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MAFGO15525 162 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 SEPT4O43236 478 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 PSMD10O75832 226 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 CCNE2O96020 404 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 TGFB3P10600 412 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 NKX3-2P78367 333 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 ATP2C1P98194 919 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 PTGDRQ13258 359 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 GNL2Q13823 731 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 SF3A1Q15459 793 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-210ENST00000542817 MYH15Q9Y2K3 1946 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 TXNP10599 105 aaKnown RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 ZNF76P36508 570 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 GRIN1Q05586 938 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 CELF3Q5SZQ8 465 aaKnown RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 COL13A1Q5TAT6 717 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 LINC00301Q8NCQ3 95 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 MPHOSPH6Q99547 160 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms