RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 MTMR1Q13613 665 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 GNPTABQ3T906 1256 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 GPRASP2Q96D09 838 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 MRVI1Q9Y6F6 885 aa11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
AC009509.3-201ENST00000542428 MYH11P35749 1972 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 SORBS3O60504 671 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 F13A1P00488 732 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 SMPD1P17405 629 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 ICAM3P32942 547 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 ZNF76P36508 570 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 CEP55Q53EZ4 464 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 PRR16Q569H4 304 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 NIPA1Q7RTP0 329 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 COPS5Q92905 334 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 MBOAT7Q96N66 472 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
AC009509.3-201ENST00000542428 CCNT1O60563 726 aaKnown RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 ARP10275 920 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 KCNA2P16389 499 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 TOB1P50616 345 aaPredicted RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 ITGB3BPQ13352 177 aaPredicted RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 TTLL4Q14679 1199 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 LY6KQ17RY6 165 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 TTC38Q5R3I4 469 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 BRAPQ7Z569 592 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 PLA2G4DQ86XP0 818 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 FAM184BQ9ULE4 1060 aa11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
AC009509.3-201ENST00000542428 MYADML2A6NDP7 307 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 SPATA31C2B4DYI2 1134 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 MEIS1O00470 390 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 NEMFO60524 1076 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ATP9AO75110 1047 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ADAMTS4O75173 837 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 FARP2O94887 1054 aaPredicted RBP11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 BRD1O95696 1058 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 GGPS1O95749 300 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 TXNP10599 105 aaKnown RBP11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ATP2B1P20020 1258 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 MCM7P33993 719 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 USP11P51784 963 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 SP2Q02086 613 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ARHGAP1Q07960 439 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 DUSP28Q4G0W2 176 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 PPP4R3AQ6IN85 833 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 GJA10Q969M2 543 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 NAP1L4Q99733 375 aaKnown RBP11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 RNF208Q9H0X6 261 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 AGO4Q9HCK5 861 aaKnown RBP11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 PCDHB6Q9Y5E3 794 aa11.85□□□□□ -0.51
AC009509.3-201ENST00000542428 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 MSH4O15457 936 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 MSCO60682 206 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 DUSP11O75319 330 aaKnown RBP11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 RARBP10826 455 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 CYP3A7P24462 503 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 Q4G0T1 1027 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 RILPL1Q5EBL4 403 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 CDHR1Q96JP9 859 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 DEFB118Q96PH6 123 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 ZNF577Q9BSK1 485 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 UPF3AQ9H1J1 476 aaKnown RBP11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 TMEM60Q9H2L4 133 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
AC009509.3-201ENST00000542428 TELO2Q9Y4R8 837 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 2443.6 ms