RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 KLF18A0A0U1RQI7 1052 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 PPFIA4O75335 1185 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 ZNF286BP0CG31 522 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 ICAM3P32942 547 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 HSPA4P34932 840 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 PSEN2P49810 448 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 GDF6Q6KF10 455 aaPredicted RBP18.89■□□□□ 0.61
CCND1-205ENST00000542367 HEATR3Q7Z4Q2 680 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 SESTD1Q86VW0 696 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 HERVK_113Q902F9 699 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
CCND1-205ENST00000542367 INPP4AQ96PE3 977 aaPredicted RBP18.89■□□□□ 0.61
CCND1-205ENST00000542367 ALG1Q9BT22 464 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 KATNAL1Q9BW62 490 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 BCAS3Q9H6U6 928 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 SNX14Q9Y5W7 946 aa18.89■□□□□ 0.61
CCND1-205ENST00000542367 GRXCR1A8MXD5 290 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 SPATA31C2B4DYI2 1134 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 HOXD8P13378 290 aaPredicted RBP18.88■□□□□ 0.61
CCND1-205ENST00000542367 FGD1P98174 961 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 MFSD10Q14728 455 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 UBE2SQ16763 222 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 KIAA0753Q2KHM9 967 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 PCNX4Q63HM2 1172 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 OTOP2Q7RTS6 562 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 C7orf31Q8N865 590 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 RETREG2Q8NC44 543 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 TTYH1Q9H313 450 aaPredicted RBP18.88■□□□□ 0.61
CCND1-205ENST00000542367 CXXC1Q9P0U4 656 aaPredicted RBP18.88■□□□□ 0.61
CCND1-205ENST00000542367 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 NAP1L2Q9ULW6 460 aaPredicted RBP18.88■□□□□ 0.61
CCND1-205ENST00000542367 CNTNAP5Q8WYK1 1306 aa18.88■□□□□ 0.61
CCND1-205ENST00000542367 GOLGA8AA7E2F4 631 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 GOLGA8BA8MQT2 603 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 HAS3O00219 553 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 FIBPO43427 364 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 REC8O95072 547 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 F2P00734 622 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 FUT2Q10981 343 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 SEMA3FQ13275 785 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 BFSP2Q13515 415 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 XRRA1Q6P2D8 792 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 Q6ZUG5 572 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 MTIF3Q9H2K0 278 aaKnown RBP18.87■□□□□ 0.61
CCND1-205ENST00000542367 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
CCND1-205ENST00000542367 GTF2IRD1Q9UHL9 959 aa18.87■□□□□ 0.61
CCND1-205ENST00000542367 V9GY48 417 aaPredicted RBP18.87■□□□□ 0.61
CCND1-205ENST00000542367 PITPNM1O00562 1244 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 DNAJB2P25686 324 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 CDC27P30260 824 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 APOBRQ0VD83 1088 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 NEDD9Q14511 834 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 WWC2Q6AWC2 1192 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 BLOC1S2Q6QNY1 142 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 CDX2Q99626 313 aaPredicted RBP18.86■□□□□ 0.61
CCND1-205ENST00000542367 C16orf70Q9BSU1 422 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 CDH23Q9H251 3354 aa18.86■□□□□ 0.61
CCND1-205ENST00000542367 SPDYE3A6NKU9 549 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 PFKMP08237 780 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 PBX2P40425 430 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 METTL7BQ6UX53 244 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 NLRX1Q86UT6 975 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 PBX4Q9BYU1 374 aa18.85■□□□□ 0.61
CCND1-205ENST00000542367 SCN5AQ14524 2016 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 TRIP12Q14669 1992 aaPredicted RBP18.84■□□□□ 0.61
CCND1-205ENST00000542367 TMEM265A0A087WTH1 108 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 NOP56O00567 594 aaKnown RBP18.84■□□□□ 0.61
CCND1-205ENST00000542367 RFC2P35250 354 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 ADD1P35611 737 aaKnown RBP18.84■□□□□ 0.61
CCND1-205ENST00000542367 RCAN1P53805 252 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 NAPAP54920 295 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 TYW1BQ6NUM6 668 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 BRF1Q92994 677 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 TIFAQ96CG3 184 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 PPP4R2Q9NY27 417 aa18.84■□□□□ 0.61
CCND1-205ENST00000542367 ZBBXA8MT70 800 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 LGALS2P05162 132 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 RPS6KB1P23443 525 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 PSMA5P28066 241 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 METAP2P50579 478 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCND1-205ENST00000542367 ZNF200P98182 395 aaPredicted RBP18.83■□□□□ 0.6
CCND1-205ENST00000542367 SLC17A8Q8NDX2 589 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 AFAP1L1Q8TED9 768 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 DHX38Q92620 1227 aaKnown RBP18.83■□□□□ 0.6
CCND1-205ENST00000542367 GPR20Q99678 358 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 SENP7Q9BQF6 1050 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 USP26Q9BXU7 913 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 RIC8AQ9NPQ8 531 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 TELO2Q9Y4R8 837 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 SLC4A7Q9Y6M7 1214 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms