RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 COX4I2Q96KJ9 171 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 GBP3Q9H0R5 595 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 FAM86C1Q9NVL1 165 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 C4AP0C0L4 1744 aa6.86□□□□□ -1.31
CPSF7-220ENST00000541963 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 DYNC1LI2O43237 492 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-220ENST00000541963 HOXB7P09629 217 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 DPEP1P16444 411 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 CHRNA4P43681 627 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 PIP4K2AP48426 406 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-220ENST00000541963 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 SSRP1Q08945 709 aaKnown RBP6.85□□□□□ -1.31
CPSF7-220ENST00000541963 SV2CQ496J9 727 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 DALRD3Q5D0E6 543 aaKnown RBP6.85□□□□□ -1.31
CPSF7-220ENST00000541963 SDE2Q6IQ49 451 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 BRIP1Q9BX63 1249 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 ASCC2Q9H1I8 757 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-220ENST00000541963 LRP2BPQ9P2M1 347 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 FBXL21Q9UKT6 434 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 KDM3BQ7LBC6 1761 aa6.85□□□□□ -1.31
CPSF7-220ENST00000541963 C10orf71Q711Q0 1435 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 CARMIL3Q8ND23 1372 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 MAP3K15Q6ZN16 1313 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 SUSD5O60279 629 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PPM1BO75688 479 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 SLITRK5O94991 958 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 FAM87AP0C7U9 286 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 YBX3P16989 372 aaKnown RBP eCLIP6.84□□□□□ -1.313e-7■■□□□ 12.8
CPSF7-220ENST00000541963 CCDC184Q52MB2 194 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 HSP90AB3PQ58FF7 597 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 NBPF12Q5TAG4 269 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 TDRD10Q5VZ19 366 aaKnown RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 DUSP27Q5VZP5 1158 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 ARHGAP27Q6ZUM4 889 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 NBPF5PQ86XG9 351 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 C2CD5Q86YS7 1000 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 LRRC47Q8N1G4 583 aaKnown RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 CNBD1Q8NA66 436 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 DNAJB8Q8NHS0 232 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PPP1R13LQ8WUF5 828 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PSMG3-AS1Q96PY0 264 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 NYXQ9GZU5 481 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PRDM5Q9NQX1 630 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 C1GALT1Q9NS00 363 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 PFDN2Q9UHV9 154 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 KCNH3Q9ULD8 1083 aa6.84□□□□□ -1.31
CPSF7-220ENST00000541963 NIP7Q9Y221 180 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPSF7-220ENST00000541963 CHD4Q14839 1912 aa6.84□□□□□ -1.32
CPSF7-220ENST00000541963 KDM2BQ8NHM5 1336 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 NOP56O00567 594 aaKnown RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 ZNF853P0CG23 659 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 NOL9Q5SY16 702 aaKnown RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 SFRP5Q5T4F7 317 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 PPP1R42Q7Z4L9 355 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 C7orf61Q8IZ16 206 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 TTLL6Q8N841 843 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 RIN3Q8TB24 985 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.322e-6■□□□□ 9.3
CPSF7-220ENST00000541963 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 IPO9Q96P70 1041 aaKnown RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 HAUS7Q99871 368 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 DDX21Q9NR30 783 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 DBF4Q9UBU7 674 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 SUGT1Q9Y2Z0 365 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 MRPL42Q9Y6G3 142 aaKnown RBP6.83□□□□□ -1.32
CPSF7-220ENST00000541963 KIF13BQ9NQT8 1826 aa6.83□□□□□ -1.32
CPSF7-220ENST00000541963 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 PXDNLA1KZ92 1463 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 HMX2A2RU54 273 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 KCNA3P22001 575 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 CHRNA5P30532 468 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 RASSF7Q02833 373 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 AIMP1Q12904 312 aaKnown RBP6.82□□□□□ -1.32
CPSF7-220ENST00000541963 AUHQ13825 339 aaKnown RBP6.82□□□□□ -1.32
CPSF7-220ENST00000541963 HLFQ16534 295 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 PARP10Q53GL7 1025 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-220ENST00000541963 CCDC30Q5VVM6 783 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 PRR5LQ6MZQ0 368 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 COPS6Q7L5N1 327 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 JAZF1Q86VZ6 243 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 WDR63Q8IWG1 891 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms