RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 ZBTB38Q8NAP3 1195 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 COBLO75128 1261 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 SPAG7O75391 227 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 MAP7D3Q8IWC1 876 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 MIF4GDA9UHW6 222 aaKnown RBP16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 PPP2R5DQ14738 602 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 ATG16L1Q676U5 607 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 ARMCX5Q6P1M9 558 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 FAM186BQ8IYM0 893 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 GGA1Q9UJY5 639 aa16.21■□□□□ 0.18
SMARCA4-207ENST00000541122 DTNBP1Q96EV8 351 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 OLFM3Q96PB7 478 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 TMED1Q13445 227 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 SYT2Q8N9I0 419 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 PDZD8Q8NEN9 1154 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 YIPF3Q9GZM5 350 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 CCDC68Q9H2F9 335 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 SLC24A3Q9HC58 644 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 PRPF6O94906 941 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 CAV1Q03135 178 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 PDCD2Q16342 344 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 CYP4F22Q6NT55 531 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 ATP10DQ9P241 1426 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 SYNGAP1Q96PV0 1343 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 GPC4O75487 556 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 LRRC24Q50LG9 513 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 GDAP1Q8TB36 358 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 CHMP6Q96FZ7 201 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 PCDHB6Q9Y5E3 794 aa16.2■□□□□ 0.18
SMARCA4-207ENST00000541122 RASSF10A6NK89 507 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 ADD2P35612 726 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 KRT80Q6KB66 452 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 ZNF449Q6P9G9 518 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 ZC3H18Q86VM9 953 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CXorf56Q9H5V9 222 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 XAB2Q9HCS7 855 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CEP72Q9P209 647 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 SGK1O00141 431 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 DDX39AO00148 427 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CA4P22748 312 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CCZ1BP86790 482 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CCZ1P86791 482 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CDC37Q16543 378 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 GJA10Q969M2 543 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 GRAMD1AQ96CP6 724 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CFBP00751 764 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 KRT26Q7Z3Y9 468 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 MRPL47Q9HD33 250 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 MID2Q9UJV3 735 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 NR5A1Q13285 461 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 BEND6Q5SZJ8 279 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 EIF2AQ9BY44 585 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 TRIM55Q9BYV6 548 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 FAM96AQ9H5X1 160 aa16.19■□□□□ 0.18
SMARCA4-207ENST00000541122 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 PDE1BQ01064 536 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 ACTN3Q08043 901 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 USH1GQ495M9 461 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 SMCR8Q8TEV9 937 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 SCYL1Q96KG9 808 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 ZMAT2Q96NC0 199 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 OSBPL9Q96SU4 736 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 AP1M1Q9BXS5 423 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 DISC1Q9NRI5 854 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 IQANK1A0A1B0GTG1 560 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 MYO1EQ12965 1108 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 BSPRYQ5W0U4 402 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 SPDL1Q96EA4 605 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 NRBF2Q96F24 287 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 PPP1R37O75864 691 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 MAGOHP61326 146 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 TRIM50Q86XT4 487 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 EPN3Q9H201 632 aa16.18■□□□□ 0.18
SMARCA4-207ENST00000541122 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 A0A1W2PQC6 194 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 TTI1O43156 1089 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 PALMO75781 387 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 MX2P20592 715 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 STX1BP61266 288 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 KIF2CQ99661 725 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms