RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 FAM217BQ9NTX9 383 aaPredicted RBP7.87□□□□□ -1.15
LDHA-219ENST00000541097 ZNFX1Q9P2E3 1918 aaKnown RBP7.87□□□□□ -1.15
LDHA-219ENST00000541097 TRIOBPQ9H2D6 2365 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 SMCHD1A6NHR9 2005 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 B4GALT4O60513 344 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 PLEKHA8P1O95397 391 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 ICAM3P32942 547 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 EVCP57679 992 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 SMAD3P84022 425 aaKnown RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 SP2Q02086 613 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 FPGSQ05932 587 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 C9orf50Q5SZB4 431 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 CELF3Q5SZQ8 465 aaKnown RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 APOA5Q6Q788 366 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 SYNE3Q6ZMZ3 975 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 SEPT14Q6ZU15 432 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 TMTC3Q6ZXV5 915 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 SESTD1Q86VW0 696 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 CMTR1Q8N1G2 835 aaKnown RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 PPTC7Q8NI37 304 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 AFG1LQ8WV93 481 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 KAT2BQ92831 832 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 VWCEQ96DN2 955 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 INPP4AQ96PE3 977 aaPredicted RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 LRRC2Q9BYS8 371 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 TRPV6Q9H1D0 765 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 PSTPIP2Q9H939 334 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 RBM28Q9NW13 759 aaKnown RBP7.86□□□□□ -1.15
LDHA-219ENST00000541097 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
LDHA-219ENST00000541097 SPATA31C2B4DYI2 1134 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 HAS3O00219 553 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 MAFGO15525 162 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 REC8O95072 547 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 MMP3P08254 477 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 MYL3P08590 195 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 CASTP20810 708 aaKnown RBP7.85□□□□□ -1.15
LDHA-219ENST00000541097 CCND2P30279 289 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 PSMC6P62333 389 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 PPIGQ13427 754 aaKnown RBP eCLIP7.85□□□□□ -1.15
LDHA-219ENST00000541097 DGKDQ16760 1214 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 TMEM240Q5SV17 173 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 PCNX4Q63HM2 1172 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 USP17L6PQ6QN14 398 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 TMEM199Q8N511 208 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 IL31RAQ8NI17 732 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 SENP7Q9BQF6 1050 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 NOC4LQ9BVI4 516 aaKnown RBP7.85□□□□□ -1.15
LDHA-219ENST00000541097 USP26Q9BXU7 913 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 SEC63Q9UGP8 760 aaKnown RBP7.85□□□□□ -1.15
LDHA-219ENST00000541097 SNX14Q9Y5W7 946 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 MRVI1Q9Y6F6 885 aa7.85□□□□□ -1.15
LDHA-219ENST00000541097 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
LDHA-219ENST00000541097 LAMA2P24043 3122 aaKnown RBP7.85□□□□□ -1.15
LDHA-219ENST00000541097 CCDC196A0A1B0GTZ2 297 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 hCG_1984214I3L0E3 225 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 ZBTB43O43298 467 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 MYCLP12524 364 aaPredicted RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 CSF2RAP15509 400 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 RXRAP19793 462 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 PSMA5P28066 241 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 CYP2C18P33260 490 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 HSDL1Q3SXM5 330 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 DHX37Q8IY37 1157 aaKnown RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 CCDC82Q8N4S0 544 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 DEFB123Q8N688 67 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 ZNF713Q8N859 430 aaPredicted RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 CTAGE1Q96RT6 745 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.84□□□□□ -1.152e-8■■■■■ 35.5
LDHA-219ENST00000541097 C16orf70Q9BSU1 422 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 TM6SF1Q9BZW5 370 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 HIPK3Q9H422 1215 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 IL23AQ9NPF7 189 aa7.84□□□□□ -1.15
LDHA-219ENST00000541097 TRMT13Q9NUP7 481 aaKnown RBP7.84□□□□□ -1.15
LDHA-219ENST00000541097 KLF18A0A0U1RQI7 1052 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.83□□□□□ -1.16
LDHA-219ENST00000541097 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.83□□□□□ -1.16
LDHA-219ENST00000541097 FIBPO43427 364 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 F2P00734 622 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 UBA1P22314 1058 aaKnown RBP7.83□□□□□ -1.16
LDHA-219ENST00000541097 RPS6KB1P23443 525 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 CDC27P30260 824 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 HOXC8P31273 242 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 RBL2Q08999 1139 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 NEDD9Q14511 834 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 RTN1Q16799 776 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 METTL7BQ6UX53 244 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 TMEM92Q6UXU6 159 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 MICU3Q86XE3 530 aa7.83□□□□□ -1.16
LDHA-219ENST00000541097 RPUSD2Q8IZ73 545 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms