RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HSD17B4P51659 736 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 LEXMQ3ZCV2 418 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 CRBNQ96SW2 442 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 JMJD4Q9H9V9 463 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 ENAHQ8N8S7 591 aaPredicted RBP31.23■■■□□ 2.59
CHFR-218ENST00000540963 AMNQ9BXJ7 453 aa31.23■■■□□ 2.59
CHFR-218ENST00000540963 DHX16O60231 1041 aaKnown RBP31.22■■■□□ 2.59
CHFR-218ENST00000540963 ZNF286BP0CG31 522 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 SDSP20132 328 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 MKRN4PQ13434 485 aaPredicted RBP31.22■■■□□ 2.59
CHFR-218ENST00000540963 MBTPS1Q14703 1052 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 MYSM1Q5VVJ2 828 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 RILPL2Q969X0 211 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 C11orf16Q9NQ32 467 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 CTNNA3Q9UI47 895 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 MTUS1Q9ULD2 1270 aa31.22■■■□□ 2.59
CHFR-218ENST00000540963 CFBP00751 764 aa31.21■■■□□ 2.59
CHFR-218ENST00000540963 TGFB3P10600 412 aa31.21■■■□□ 2.59
CHFR-218ENST00000540963 HTRA4P83105 476 aaPredicted RBP31.21■■■□□ 2.59
CHFR-218ENST00000540963 STOX1Q6ZVD7 989 aa31.21■■■□□ 2.59
CHFR-218ENST00000540963 SERINC5Q86VE9 423 aa31.21■■■□□ 2.59
CHFR-218ENST00000540963 KHSRPQ92945 711 aaKnown RBP eCLIP31.21■■■□□ 2.59
CHFR-218ENST00000540963 SAMD11Q96NU1 681 aa31.21■■■□□ 2.59
CHFR-218ENST00000540963 AMHP03971 560 aa31.2■■■□□ 2.59
CHFR-218ENST00000540963 CELF3Q5SZQ8 465 aaKnown RBP31.2■■■□□ 2.59
CHFR-218ENST00000540963 SP7Q8TDD2 431 aaPredicted RBP31.2■■■□□ 2.59
CHFR-218ENST00000540963 WNT8BQ93098 351 aa31.2■■■□□ 2.59
CHFR-218ENST00000540963 PDCD2LQ9BRP1 358 aa31.2■■■□□ 2.59
CHFR-218ENST00000540963 ZSWIM5Q9P217 1185 aa31.2■■■□□ 2.59
CHFR-218ENST00000540963 B4E1Z4 1266 aa31.19■■■□□ 2.58
CHFR-218ENST00000540963 OPLAHO14841 1288 aa31.19■■■□□ 2.58
CHFR-218ENST00000540963 FAM178BQ8IXR5 827 aa31.19■■■□□ 2.58
CHFR-218ENST00000540963 FBXO22Q8NEZ5 403 aa31.19■■■□□ 2.58
CHFR-218ENST00000540963 VAT1LQ9HCJ6 419 aa31.19■■■□□ 2.58
CHFR-218ENST00000540963 RGS20O76081 388 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 PUS10Q3MIT2 529 aaKnown RBP31.18■■■□□ 2.58
CHFR-218ENST00000540963 HSDL1Q3SXM5 330 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 VSIG10LQ86VR7 867 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 DBF4BQ8NFT6 615 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 MTMR8Q96EF0 704 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 SPATA33Q96N06 139 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 KRT23Q9C075 422 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 CD320Q9NPF0 282 aa31.18■■■□□ 2.58
CHFR-218ENST00000540963 COL4A6Q14031 1691 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 RSPH10B2B2RC85 870 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 RSPH10BP0C881 870 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 RRP1P56182 461 aaKnown RBP31.17■■■□□ 2.58
CHFR-218ENST00000540963 ZNF200P98182 395 aaPredicted RBP31.17■■■□□ 2.58
CHFR-218ENST00000540963 TRAF1Q13077 416 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 PTPROQ16827 1216 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 PLEKHG4Q58EX7 1191 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.17■■■□□ 2.58
CHFR-218ENST00000540963 MRPL38Q96DV4 380 aaKnown RBP31.17■■■□□ 2.58
CHFR-218ENST00000540963 DSCC1Q9BVC3 393 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 CNNM2Q9H8M5 875 aa31.17■■■□□ 2.58
CHFR-218ENST00000540963 CAND2O75155 1236 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 HOXC8P31273 242 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 IMMTQ16891 758 aaKnown RBP31.16■■■□□ 2.58
CHFR-218ENST00000540963 FAM117BQ6P1L5 589 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 GJD3Q8N144 294 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 GADD45GIP1Q8TAE8 222 aaPredicted RBP31.16■■■□□ 2.58
CHFR-218ENST00000540963 C17orf80Q9BSJ5 609 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 C16orf70Q9BSU1 422 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 OSBPL3Q9H4L5 887 aa31.16■■■□□ 2.58
CHFR-218ENST00000540963 HIP1O00291 1037 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 GGPS1O95749 300 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 KCNA5P22460 613 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 THPOP40225 353 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 HIC1Q14526 733 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 PGM5Q15124 567 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 MYOCDQ8IZQ8 938 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 UBAC1Q9BSL1 405 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 LNPKQ9C0E8 428 aa31.15■■■□□ 2.58
CHFR-218ENST00000540963 ZBTB5O15062 677 aa31.14■■■□□ 2.58
CHFR-218ENST00000540963 MYCLP12524 364 aaPredicted RBP31.14■■■□□ 2.58
CHFR-218ENST00000540963 PCDHA1Q9Y5I3 950 aa31.14■■■□□ 2.58
CHFR-218ENST00000540963 C17orf102A2RUQ5 167 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 PRR33A8MZF0 331 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 KLRF2D3W0D1 207 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 AAMPQ13685 434 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 TIGD5Q53EQ6 642 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 IFIT1BQ5T764 474 aaKnown RBP31.13■■■□□ 2.57
CHFR-218ENST00000540963 CWC27Q6UX04 472 aaKnown RBP31.13■■■□□ 2.57
CHFR-218ENST00000540963 ATP6V0A1Q93050 837 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 DIAPH3Q9NSV4 1193 aa31.13■■■□□ 2.57
CHFR-218ENST00000540963 H3BRB1 525 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 UBA1P22314 1058 aaKnown RBP31.12■■■□□ 2.57
CHFR-218ENST00000540963 CCND2P30279 289 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 EPC2Q52LR7 807 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 PTCRAQ6ISU1 281 aaPredicted RBP31.12■■■□□ 2.57
CHFR-218ENST00000540963 STAG2Q8N3U4 1231 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 NEK9Q8TD19 979 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 SEPT8Q92599 483 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 TOP1MTQ969P6 601 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 TUT1Q9H6E5 874 aaKnown RBP31.12■■■□□ 2.57
CHFR-218ENST00000540963 MLXIPQ9HAP2 919 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 RALGAPA2Q2PPJ7 1873 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 NLRC5Q86WI3 1866 aa31.12■■■□□ 2.57
CHFR-218ENST00000540963 GRXCR2A6NFK2 248 aa31.11■■■□□ 2.57
CHFR-218ENST00000540963 ALADP13716 330 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms