RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 UBE2SQ16763 222 aa16.32■□□□□ 0.2
USP28-209ENST00000540925 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
USP28-209ENST00000540925 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
USP28-209ENST00000540925 TRPV6Q9H1D0 765 aa16.32■□□□□ 0.2
USP28-209ENST00000540925 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
USP28-209ENST00000540925 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
USP28-209ENST00000540925 RAG1P15918 1043 aa16.31■□□□□ 0.2
USP28-209ENST00000540925 IFNAR1P17181 557 aa16.31■□□□□ 0.2
USP28-209ENST00000540925 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
USP28-209ENST00000540925 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
USP28-209ENST00000540925 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
USP28-209ENST00000540925 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
USP28-209ENST00000540925 BCAS3Q9H6U6 928 aa16.31■□□□□ 0.2
USP28-209ENST00000540925 MYH7BA7E2Y1 1941 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 HAS3O00219 553 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 FIBPO43427 364 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 GGPS1O95749 300 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 SCG2P13521 617 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 ITGB5P18084 799 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 NAPAP54920 295 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
USP28-209ENST00000540925 DGKDQ16760 1214 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 GNPTABQ3T906 1256 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 C9orf50Q5SZB4 431 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 MFSD5Q6N075 450 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 SESTD1Q86VW0 696 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
USP28-209ENST00000540925 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 SENP7Q9BQF6 1050 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
USP28-209ENST00000540925 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 UBIAD1Q9Y5Z9 338 aa16.3■□□□□ 0.2
USP28-209ENST00000540925 PPFIA4O75335 1185 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 SEC24BO95487 1268 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 F2P00734 622 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 SHHQ15465 462 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 CRYGNQ8WXF5 182 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 GPRASP2Q96D09 838 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 RNF26Q9BY78 433 aaPredicted RBP16.29■□□□□ 0.2
USP28-209ENST00000540925 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
USP28-209ENST00000540925 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
USP28-209ENST00000540925 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
USP28-209ENST00000540925 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
USP28-209ENST00000540925 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 ADCY7P51828 1080 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 FPGSQ05932 587 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 GPR153Q6NV75 609 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 METTL7BQ6UX53 244 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 C16orf59Q7L2K0 433 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 PHKBQ93100 1093 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 C16orf70Q9BSU1 422 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 ZMYND12Q9H0C1 365 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
USP28-209ENST00000540925 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 FOSP01100 380 aaPredicted RBP16.27■□□□□ 0.2
USP28-209ENST00000540925 KCNA2P16389 499 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 CYP2C18P33260 490 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
USP28-209ENST00000540925 AP3B2Q13367 1082 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 NEDD9Q14511 834 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 WNT8AQ9H1J5 351 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 HIPK3Q9H422 1215 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
USP28-209ENST00000540925 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
USP28-209ENST00000540925 CDH23Q9H251 3354 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 ATP9AO75110 1047 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 SUPT20HL2P0C7V6 817 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 ZNF286BP0CG31 522 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 HOXC8P31273 242 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 SREBF1P36956 1147 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 PSEN2P49810 448 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 RASIP1Q5U651 963 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 CYFIP1Q7L576 1253 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 GPR20Q99678 358 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 ANO3Q9BYT9 981 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 PPP1R12CQ9BZL4 782 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
USP28-209ENST00000540925 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 MAFGO15525 162 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 SORBS3O60504 671 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
USP28-209ENST00000540925 CYP2C9P11712 490 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 CSF2RAP15509 400 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 PPIGQ13427 754 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP28-209ENST00000540925 MFSD10Q14728 455 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
USP28-209ENST00000540925 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms