RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SPATA6Q9NWH7 488 aaPredicted RBP5.74□□□□□ -1.49
MDM2-227ENST00000540709 PPARGC1AQ9UBK2 798 aaKnown RBP5.74□□□□□ -1.49
MDM2-227ENST00000540709 PFDN2Q9UHV9 154 aa5.74□□□□□ -1.49
MDM2-227ENST00000540709 PCDHB4Q9Y5E5 795 aa5.74□□□□□ -1.49
MDM2-227ENST00000540709 PABPC1P11940 636 aaKnown RBP5.73□□□□□ -1.49
MDM2-227ENST00000540709 CAP1Q01518 475 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 IFRD2Q12894 506 aaPredicted RBP5.73□□□□□ -1.49
MDM2-227ENST00000540709 UBXN11Q5T124 520 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 YOD1Q5VVQ6 348 aaPredicted RBP5.73□□□□□ -1.49
MDM2-227ENST00000540709 ERICH6BQ5W0A0 696 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 FAM126BQ8IXS8 530 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 LRRC47Q8N1G4 583 aaKnown RBP5.73□□□□□ -1.49
MDM2-227ENST00000540709 EPB41L1Q9H4G0 881 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 ARHGEF4Q9NR80 690 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 RTEL1Q9NZ71 1219 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 NCANO14594 1321 aa5.73□□□□□ -1.49
MDM2-227ENST00000540709 TRAV20A0A0B4J274 112 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 SH3D21A4FU49 640 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 KRIT1O00522 736 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 COL6A2P12110 1019 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 GJA9P57773 515 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 DLX2Q07687 328 aaPredicted RBP5.72□□□□□ -1.49
MDM2-227ENST00000540709 MTERF2Q49AM1 385 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 MCTP2Q6DN12 878 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 SPATC1Q76KD6 591 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 MIB1Q86YT6 1006 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 RBM12BQ8IXT5 1001 aaKnown RBP5.72□□□□□ -1.49
MDM2-227ENST00000540709 KYQ8NBH2 561 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 ST13P5Q8NFI4 369 aaPredicted RBP5.72□□□□□ -1.49
MDM2-227ENST00000540709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.72□□□□□ -1.49
MDM2-227ENST00000540709 TOE1Q96GM8 510 aaKnown RBP5.72□□□□□ -1.49
MDM2-227ENST00000540709 ZSWIM3Q96MP5 696 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 CDC6Q99741 560 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 MYOTQ9UBF9 498 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 CROTQ9UKG9 612 aa5.72□□□□□ -1.49
MDM2-227ENST00000540709 TCRBV5S2A0A599 114 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 DDX3XO00571 662 aaKnown RBP eCLIP5.71□□□□□ -1.5
MDM2-227ENST00000540709 SLC27A2O14975 620 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
MDM2-227ENST00000540709 ITGA1P56199 1179 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PLP2Q04941 152 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 GRIN1Q05586 938 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 RTP5Q14D33 572 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PRAMEF18Q5VWM3 479 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 FRMD5Q7Z6J6 570 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 Q8N1Y9 231 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 DCAF4Q8WV16 495 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 OSBP2Q969R2 916 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
MDM2-227ENST00000540709 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PCDH18Q9HCL0 1135 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 ZNF652Q9Y2D9 606 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 NPFFR2Q9Y5X5 522 aa5.71□□□□□ -1.5
MDM2-227ENST00000540709 PDPK1O15530 556 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 MAFKO60675 156 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 CAPNS1P04632 268 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 CELA3BP08861 270 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 GNAT1P11488 350 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 CNR2P34972 360 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 THBS2P35442 1172 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 SSRP1Q08945 709 aaKnown RBP5.7□□□□□ -1.5
MDM2-227ENST00000540709 TESK1Q15569 626 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 CR1LQ2VPA4 569 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 RGL3Q3MIN7 710 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 TMC5Q6UXY8 1006 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
MDM2-227ENST00000540709 TTLL6Q8N841 843 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 TEPSINQ96N21 525 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 SPATA9Q9BWV2 254 aa5.7□□□□□ -1.5
MDM2-227ENST00000540709 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
MDM2-227ENST00000540709 TADA3O75528 432 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 FGFR1P11362 822 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 NTRK3Q16288 839 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 IFNL3Q8IZI9 196 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 CXorf38Q8TB03 319 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 ADAMTS17Q8TE56 1095 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 SMOC1Q9H4F8 434 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 DTLQ9NZJ0 730 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 RBPJLQ9UBG7 517 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 TRAF6Q9Y4K3 522 aa5.69□□□□□ -1.5
MDM2-227ENST00000540709 NOBOXO60393 691 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 CYP1A1P04798 512 aaPredicted RBP5.68□□□□□ -1.5
MDM2-227ENST00000540709 GRK2P25098 689 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 RPL13P26373 211 aaKnown RBP5.68□□□□□ -1.5
MDM2-227ENST00000540709 GRK3P35626 688 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 SPIRE1Q08AE8 756 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 KIZQ2M2Z5 673 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 PHF19Q5T6S3 580 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 TEPPQ6URK8 271 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 RSPO2Q6UXX9 243 aaPredicted RBP5.68□□□□□ -1.5
MDM2-227ENST00000540709 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 CLIC6Q96NY7 704 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 ALG1Q9BT22 464 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 SLC6A20Q9NP91 592 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 DUSP10Q9Y6W6 482 aa5.68□□□□□ -1.5
MDM2-227ENST00000540709 LRG1P02750 347 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms