RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 CRYGNQ8WXF5 182 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 TINF2Q9BSI4 451 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 PQBP1O60828 265 aaKnown RBP19.08■□□□□ 0.64
UBC-208ENST00000540700 CLTBP09497 229 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 COL9A1P20849 921 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 MRPS9P82933 396 aaKnown RBP19.08■□□□□ 0.64
UBC-208ENST00000540700 PGM5Q15124 567 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 TJAP1Q5JTD0 557 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 ARHGEF16Q5VV41 709 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 DIS3L2Q8IYB7 885 aaKnown RBP19.08■□□□□ 0.64
UBC-208ENST00000540700 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.08■□□□□ 0.64
UBC-208ENST00000540700 SLC5A4Q9NY91 659 aa19.08■□□□□ 0.64
UBC-208ENST00000540700 RAG1P15918 1043 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 XBP1P17861 261 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 KRT2P35908 639 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 AP3B2Q13367 1082 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 GALNT17Q6IS24 598 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 NSUN6Q8TEA1 469 aaKnown RBP19.07■□□□□ 0.64
UBC-208ENST00000540700 GLT8D2Q9H1C3 349 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 XPNPEP3Q9NQH7 507 aa19.07■□□□□ 0.64
UBC-208ENST00000540700 SYNGAP1Q96PV0 1343 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 TNFRSF10AO00220 468 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 RGS20O76081 388 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 PGK1P00558 417 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 NR3C2P08235 984 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 SYT1P21579 422 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 BECN1Q14457 450 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 C1orf53Q5VUE5 145 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
UBC-208ENST00000540700 FBXO16Q8IX29 292 aaPredicted RBP19.06■□□□□ 0.64
UBC-208ENST00000540700 BICD2Q8TD16 824 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 PPM1EQ8WY54 764 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 ADD3Q9UEY8 706 aaKnown RBP19.06■□□□□ 0.64
UBC-208ENST00000540700 RAPGEFL1Q9UHV5 662 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 PHF24Q9UPV7 400 aa19.06■□□□□ 0.64
UBC-208ENST00000540700 TMEM265A0A087WTH1 108 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 SPDYE3A6NKU9 549 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 WNT7AO00755 349 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 ZNF865P0CJ78 1059 aaPredicted RBP19.05■□□□□ 0.64
UBC-208ENST00000540700 RARBP10826 455 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 PTGS1P23219 599 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 DNAJB2P25686 324 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 SREBF1P36956 1147 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 FPGSQ05932 587 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 PKP1Q13835 747 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 TRIM29Q14134 588 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 EEPD1Q7L9B9 569 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 VSIG10LQ86VR7 867 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 TEX2Q8IWB9 1127 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 MSL3Q8N5Y2 521 aaKnown RBP19.05■□□□□ 0.64
UBC-208ENST00000540700 PDGFCQ9NRA1 345 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 TMEM39AQ9NV64 488 aa19.05■□□□□ 0.64
UBC-208ENST00000540700 MCM3APO60318 1980 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 ASB14A6NK59 587 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 ADCY6O43306 1168 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
UBC-208ENST00000540700 MYCLP12524 364 aaPredicted RBP19.04■□□□□ 0.64
UBC-208ENST00000540700 TAPT1Q6NXT6 567 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 PIK3AP1Q6ZUJ8 805 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 CYP2W1Q8TAV3 490 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 IWS1Q96ST2 819 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 MTMR6Q9Y217 621 aa19.04■□□□□ 0.64
UBC-208ENST00000540700 LOC102724159A0A0B4J2E5 919 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.03■□□□□ 0.64
UBC-208ENST00000540700 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.03■□□□□ 0.64
UBC-208ENST00000540700 KIAA0355O15063 1070 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
UBC-208ENST00000540700 ARHGAP4P98171 946 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 SEMA3FQ13275 785 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 PWP2Q15269 919 aaKnown RBP19.03■□□□□ 0.64
UBC-208ENST00000540700 INF2Q27J81 1249 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 PCNX4Q63HM2 1172 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 RNF180Q86T96 592 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 TBCKQ8TEA7 893 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 LENG1Q96BZ8 264 aaPredicted RBP19.03■□□□□ 0.64
UBC-208ENST00000540700 ZNF576Q9H609 170 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 RTEL1Q9NZ71 1219 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 KIF3AQ9Y496 699 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 BDP1A6H8Y1 2624 aa19.03■□□□□ 0.64
UBC-208ENST00000540700 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.02■□□□□ 0.64
UBC-208ENST00000540700 A0A1W2PQ45 241 aaPredicted RBP19.02■□□□□ 0.64
UBC-208ENST00000540700 A0A1W2PQY0 241 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 ARIH2O95376 493 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 ITGB5P18084 799 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.64
UBC-208ENST00000540700 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
UBC-208ENST00000540700 PDE4DQ08499 809 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 ACVR2BQ13705 512 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 KRT25Q7Z3Z0 450 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 TIFAQ96CG3 184 aa19.02■□□□□ 0.64
UBC-208ENST00000540700 FOXP1Q9H334 677 aaPredicted RBP19.02■□□□□ 0.64
UBC-208ENST00000540700 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
UBC-208ENST00000540700 FAM86B1E9PN63 330 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 H3BQV1 296 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 CYP3A4P08684 503 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 FAM86B2P0C5J1 330 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 CCND2P30279 289 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 DDIT3P35638 169 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 NONOQ15233 471 aaKnown RBP eCLIP19.01■□□□□ 0.631e-7■■■■■ 29.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms