RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
TNFRSF1A-213ENST00000540022 JADE2Q9NQC1 790 aa21.44■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ZNF236Q9UL36 1845 aa21.44■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ASB14A6NK59 587 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ARP10275 920 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MAMDC4Q6UXC1 1216 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ARMCX2Q7L311 632 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 NIPA1Q7RTP0 329 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 HAS1Q92839 578 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MTMR9Q96QG7 549 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MPHOSPH6Q99547 160 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 KCNMB3Q9NPA1 279 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 FLRT1Q9NZU1 646 aa21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MORC2Q9Y6X9 1032 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MYH7BA7E2Y1 1941 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MYH15Q9Y2K3 1946 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 POTEFA5A3E0 1075 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 PPP6R2O75170 966 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 EIF3JO75822 258 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 STAM2O75886 525 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 OR52Z1P0C646 297 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 CALCRLQ16602 461 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 TMEM87AQ8NBN3 555 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ETNPPLQ8TBG4 499 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 SH3TC2Q8TF17 1288 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 GJA10Q969M2 543 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 UIMC1Q96RL1 719 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 APBA2Q99767 749 aa21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 FBXO2Q9UK22 296 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF1A-213ENST00000540022 LAD1O00515 517 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MSH4O15457 936 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MTMR1Q13613 665 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 IL17AQ16552 155 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 EEPD1Q7L9B9 569 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 KCNH7Q9NS40 1196 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ELP1O95163 1332 aa21.41■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ELNP15502 786 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ME1P48163 572 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 GRIN1Q05586 938 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 ARL6IP4Q66PJ3 421 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 NLRX1Q86UT6 975 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 RAET1EQ8TD07 263 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 GPRASP2Q96D09 838 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 TINF2Q9BSI4 451 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 PCDHA7Q9UN72 937 aa21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 SRPRBQ9Y5M8 271 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-213ENST00000540022 TBX3O15119 743 aa21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 PRPF40AO75400 957 aaKnown RBP21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 SNAI1O95863 264 aaPredicted RBP21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 MCM4P33991 863 aa21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 PRPHP41219 470 aa21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 SEMA3FQ13275 785 aa21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.39■■□□□ 1.02
TNFRSF1A-213ENST00000540022 XRCC5P13010 732 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TXKP42681 527 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TRIM32Q13049 653 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 IRF5Q13568 498 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GNPTABQ3T906 1256 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 AXDND1Q5T1B0 1012 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SEPT14Q6ZU15 432 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 FBXO16Q8IX29 292 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 MSL3Q8N5Y2 521 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 KRI1Q8N9T8 703 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TRIB2Q92519 343 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 FAM20AQ96MK3 541 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 CLIC6Q96NY7 704 aa21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 AGO4Q9HCK5 861 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 VWA3AA6NCI4 1184 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 MAFGO15525 162 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 MARCH6O60337 910 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ATP9AO75110 1047 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 IGHA2P01877 340 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GRK4P32298 578 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 OLFML2BQ68BL8 750 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SLC5A5Q92911 643 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 FERMT2Q96AC1 680 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ZNF577Q9BSK1 485 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 KATNBL1Q9H079 304 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PKD2L1Q9P0L9 805 aa21.38■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SPATA31C2B4DYI2 1134 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GOLGA6L22H0YM25 854 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 IPO5O00410 1097 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ADCY3O60266 1144 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GADD45BO75293 160 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ICAM3P32942 547 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 DTHD1Q6ZMT9 781 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TTC12Q9H892 705 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ZNFX1Q9P2E3 1918 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 CUTAO60888 179 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PSMD10O75832 226 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 CYP2C19P33261 490 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TECP42680 631 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ITGB3BPQ13352 177 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TPRNQ4KMQ1 711 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms