RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 GDAQ9Y2T3 454 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 MYMKA6NI61 221 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 MEIS1O00470 390 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 FGFR1OPO95684 399 aaKnown RBP19.16■□□□□ 0.66
LTBR-207ENST00000539925 ALAS1P13196 640 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 CCNE1P24864 410 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 STX17P56962 302 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 C9orf131Q5VYM1 1079 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 CCDC65Q8IXS2 484 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 NEK9Q8TD19 979 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 CACTINQ8WUQ7 758 aaKnown RBP19.16■□□□□ 0.66
LTBR-207ENST00000539925 LIMA1Q9UHB6 759 aaKnown RBP19.16■□□□□ 0.66
LTBR-207ENST00000539925 ADAMTS5Q9UNA0 930 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 KIAA1024Q9UPX6 916 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 CSADQ9Y600 493 aa19.16■□□□□ 0.66
LTBR-207ENST00000539925 FRMPD4Q14CM0 1322 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 EEF1GP26641 437 aaKnown RBP19.15■□□□□ 0.66
LTBR-207ENST00000539925 DSG3P32926 999 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 KCNJ6P48051 423 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 IREB2P48200 963 aaKnown RBP19.15■□□□□ 0.66
LTBR-207ENST00000539925 NOLC1Q14978 699 aaKnown RBP eCLIP19.15■□□□□ 0.66
LTBR-207ENST00000539925 SPECC1LQ69YQ0 1117 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 NCAPH2Q6IBW4 605 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 GUF1Q8N442 669 aaKnown RBP19.15■□□□□ 0.66
LTBR-207ENST00000539925 DDX12PQ92771 950 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 NUDT12Q9BQG2 462 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
LTBR-207ENST00000539925 VAV3Q9UKW4 847 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 AFG3L2Q9Y4W6 797 aa19.15■□□□□ 0.66
LTBR-207ENST00000539925 USP2O75604 605 aaPredicted RBP19.14■□□□□ 0.66
LTBR-207ENST00000539925 PLA2G4BP0C869 781 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 NR1I3Q14994 352 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 LRCH2Q5VUJ6 765 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 PCNX4Q63HM2 1172 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 CPXCR1Q8N123 301 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 TBC1D5Q92609 795 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 P2RX5Q93086 422 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 MXRA8Q9BRK3 442 aa19.14■□□□□ 0.66
LTBR-207ENST00000539925 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.66
LTBR-207ENST00000539925 MAGEC2Q9UBF1 373 aaPredicted RBP19.14■□□□□ 0.66
LTBR-207ENST00000539925 SSC5DA1L4H1 1573 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 OFD1O75665 1012 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 PSMD10O75832 226 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 TPM2P07951 284 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 HMGCS2P54868 508 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 CATSPERGQ6ZRH7 1159 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 NAP1L5Q96NT1 182 aaPredicted RBP19.14■□□□□ 0.65
LTBR-207ENST00000539925 TEKT3Q9BXF9 490 aa19.14■□□□□ 0.65
LTBR-207ENST00000539925 ADD3Q9UEY8 706 aaKnown RBP19.14■□□□□ 0.65
LTBR-207ENST00000539925 GAS7O60861 476 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 EHHADHQ08426 723 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 OTOP1Q7RTM1 612 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 CATSPER3Q86XQ3 398 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 TRIM47Q96LD4 638 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 ZNF577Q9BSK1 485 aa19.13■□□□□ 0.65
LTBR-207ENST00000539925 POTEB3A0JP26 581 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 POTECB2RU33 542 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 NFIBO00712 420 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 MED24O75448 989 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 SKILP12757 684 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 YBX3P16989 372 aaKnown RBP eCLIP19.12■□□□□ 0.656e-11■■□□□ 12.3
LTBR-207ENST00000539925 TAL1P17542 331 aaPredicted RBP19.12■□□□□ 0.65
LTBR-207ENST00000539925 LRRC63Q05C16 580 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 TCP11X2Q5H9J9 407 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 PRAMEF18Q5VWM3 479 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 POTEBQ6S5H4 581 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 RNF207Q6ZRF8 634 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 KCNK18Q7Z418 384 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 SYT2Q8N9I0 419 aaPredicted RBP19.12■□□□□ 0.65
LTBR-207ENST00000539925 SYTL5Q8TDW5 730 aaPredicted RBP19.12■□□□□ 0.65
LTBR-207ENST00000539925 KCND1Q9NSA2 647 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 ITIH6Q6UXX5 1313 aa19.12■□□□□ 0.65
LTBR-207ENST00000539925 KCNJ18B7U540 433 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 IDEP14735 1019 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 STK4Q13043 487 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 TRIM14Q14142 442 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 KCNJ12Q14500 433 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 EPHA7Q15375 998 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 ECM1Q16610 540 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 CENPPQ6IPU0 288 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 APTXQ7Z2E3 356 aaKnown RBP19.11■□□□□ 0.65
LTBR-207ENST00000539925 GPBP1Q86WP2 473 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 MB21D1Q8N884 522 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 DNAJC19Q96DA6 116 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 ATG4CQ96DT6 458 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 TSG101Q99816 390 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 EIF2AK1Q9BQI3 630 aaKnown RBP19.11■□□□□ 0.65
LTBR-207ENST00000539925 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 PANK4Q9NVE7 773 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 PYCARDQ9ULZ3 195 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 IPO5O00410 1097 aaKnown RBP19.11■□□□□ 0.65
LTBR-207ENST00000539925 CCP110O43303 1012 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 EYA4O95677 639 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 TPM1P09493 284 aa19.11■□□□□ 0.65
LTBR-207ENST00000539925 SPATA31C1P0DKV0 1188 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms