RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
VTN-202ENST00000539746 SENP7Q9BQF6 1050 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 DISC1Q9NRI5 854 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 ANO10Q9NW15 660 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 KCND2Q9NZV8 630 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
VTN-202ENST00000539746 NFASCO94856 1347 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 CA12O43570 354 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 DTNBO60941 627 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
VTN-202ENST00000539746 HOXD10P28358 340 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 ABCD1P33897 745 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 GJA5P36382 358 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 TECP42680 631 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 NDUFA8P51970 172 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 PPP2R5CQ13362 524 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 STIM1Q13586 685 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 ZSCAN23Q3MJ62 389 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 EARS2Q5JPH6 523 aaKnown RBP13.24□□□□□ -0.29
VTN-202ENST00000539746 SHC4Q6S5L8 630 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 GSDMAQ96QA5 445 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 FTOQ9C0B1 505 aaKnown RBP eCLIP13.24□□□□□ -0.29
VTN-202ENST00000539746 BTBD7Q9P203 1132 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 PPME1Q9Y570 386 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
VTN-202ENST00000539746 PTPRFP10586 1907 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 WDR64B1ANS9 1081 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 TDP2O95551 362 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 SCP2P22307 547 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 ALDH5A1P51649 535 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 BRDTQ58F21 947 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 ZNF746Q6NUN9 644 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 DLK2Q6UY11 383 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 SLC30A10Q6XR72 485 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 SV2BQ7L1I2 683 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 ENGASEQ8NFI3 743 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 ETNPPLQ8TBG4 499 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 SLC5A5Q92911 643 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
VTN-202ENST00000539746 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
VTN-202ENST00000539746 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
VTN-202ENST00000539746 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 NKRFO15226 690 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTN-202ENST00000539746 NR1I2O75469 434 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTN-202ENST00000539746 RPA1P27694 616 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 ICAM3P32942 547 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 CCT6AP40227 531 aaKnown RBP13.22□□□□□ -0.29
VTN-202ENST00000539746 RGS2P41220 211 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 FCGRTP55899 365 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
VTN-202ENST00000539746 DGKZQ13574 1117 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
VTN-202ENST00000539746 GSE1Q14687 1217 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 STX1AQ16623 288 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 FAM43AQ8N2R8 423 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
VTN-202ENST00000539746 SLC17A8Q8NDX2 589 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 SCFD2Q8WU76 684 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 KCNH7Q9NS40 1196 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
VTN-202ENST00000539746 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 MSH4O15457 936 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 SLC37A4O43826 429 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 PSAPP07602 524 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 CYP2C8P10632 490 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 SNW1Q13573 536 aaKnown RBP13.21□□□□□ -0.29
VTN-202ENST00000539746 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 POSTNQ15063 836 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 EPHA7Q15375 998 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 HYIQ5T013 277 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
VTN-202ENST00000539746 RBM43Q6ZSC3 357 aaKnown RBP13.21□□□□□ -0.29
VTN-202ENST00000539746 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms