RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RGS20O76081 388 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
DDB1-216ENST00000539739 ICAM3P32942 547 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 CACNB2Q08289 660 aaPredicted RBP17.48■□□□□ 0.39
DDB1-216ENST00000539739 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
DDB1-216ENST00000539739 TTLL4Q14679 1199 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
DDB1-216ENST00000539739 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 IQSEC1Q6DN90 963 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
DDB1-216ENST00000539739 KATNBL1Q9H079 304 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 KCNH7Q9NS40 1196 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 MCM3APO60318 1980 aa17.48■□□□□ 0.39
DDB1-216ENST00000539739 IGLV3-22A0A075B6J6 115 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
DDB1-216ENST00000539739 BMP15O95972 392 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 INHAP05111 366 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
DDB1-216ENST00000539739 RBM10P98175 930 aaKnown RBP17.47■□□□□ 0.39
DDB1-216ENST00000539739 TAPT1Q6NXT6 567 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
DDB1-216ENST00000539739 RBM47A0AV96 593 aaKnown RBP17.47■□□□□ 0.39
DDB1-216ENST00000539739 SPATA31C2B4DYI2 1134 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 WNT7AO00755 349 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 SLC37A4O43826 429 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 ARP10275 920 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 CYBAP13498 195 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 CNGA1P29973 690 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 TRIM32Q13049 653 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 CCDC144BQ3MJ40 725 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 FAM184BQ9ULE4 1060 aa17.47■□□□□ 0.39
DDB1-216ENST00000539739 TBX3O15119 743 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 TXNP10599 105 aaKnown RBP17.46■□□□□ 0.39
DDB1-216ENST00000539739 AKR1A1P14550 325 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 CALCRLQ16602 461 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 MAP3K21Q5TCX8 1036 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 GIMAP8Q8ND71 665 aaPredicted RBP17.46■□□□□ 0.39
DDB1-216ENST00000539739 SH3TC2Q8TF17 1288 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 LENG9Q96B70 501 aa17.46■□□□□ 0.39
DDB1-216ENST00000539739 IPO5O00410 1097 aaKnown RBP17.45■□□□□ 0.38
DDB1-216ENST00000539739 LAD1O00515 517 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.38
DDB1-216ENST00000539739 ADCYAP1R1P41586 468 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 KRT85P78386 507 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 SEMA3FQ13275 785 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 NEDD9Q14511 834 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
DDB1-216ENST00000539739 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 FAM20AQ96MK3 541 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 SENP7Q9BQF6 1050 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 AGO4Q9HCK5 861 aaKnown RBP17.45■□□□□ 0.38
DDB1-216ENST00000539739 HMX1Q9NP08 348 aaPredicted RBP17.45■□□□□ 0.38
DDB1-216ENST00000539739 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
DDB1-216ENST00000539739 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
DDB1-216ENST00000539739 MSH4O15457 936 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 SEPT4O43236 478 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
DDB1-216ENST00000539739 TNFAIP2Q03169 654 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 CEBPZQ03701 1054 aaKnown RBP17.44■□□□□ 0.38
DDB1-216ENST00000539739 DNM1Q05193 864 aaKnown RBP17.44■□□□□ 0.38
DDB1-216ENST00000539739 PTGDRQ13258 359 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 LY6KQ17RY6 165 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 CCDC62Q6P9F0 684 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 TRPV1Q8NER1 839 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 ETNPPLQ8TBG4 499 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 SDF4Q9BRK5 362 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 KCNMB3Q9NPA1 279 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 TFIP11Q9UBB9 837 aaKnown RBP17.44■□□□□ 0.38
DDB1-216ENST00000539739 TCEAL9Q9UHQ7 104 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 LRRC37A2A6NM11 1700 aa17.44■□□□□ 0.38
DDB1-216ENST00000539739 ARIH2O95376 493 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 OR52Z1P0C646 297 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 DUSP28Q4G0W2 176 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.43■□□□□ 0.38
DDB1-216ENST00000539739 GAS7O60861 476 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 ATP9AO75110 1047 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 KCNA2P16389 499 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 SMPD1P17405 629 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
DDB1-216ENST00000539739 CCND3P30281 292 aaPredicted RBP17.43■□□□□ 0.38
DDB1-216ENST00000539739 NASPP49321 788 aaPredicted RBP17.43■□□□□ 0.38
DDB1-216ENST00000539739 STK38Q15208 465 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 LRCH2Q5VUJ6 765 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
DDB1-216ENST00000539739 SLC5A5Q92911 643 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 MTMR9Q96QG7 549 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 RIT2Q99578 217 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
DDB1-216ENST00000539739 TMEM60Q9H2L4 133 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms