RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZFP91Q96JP5 570 aaPredicted RBP19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 CCDC66A2RUB6 948 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 IKBKBO14920 756 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 TUBB4AP04350 444 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 FANCCQ00597 558 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 TEX2Q8IWB9 1127 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 SMYD4Q8IYR2 804 aaPredicted RBP19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 SNX29Q8TEQ0 813 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 ZC3H15Q8WU90 426 aaKnown RBP19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 PARP14Q460N5 1801 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 HSD17B4P51659 736 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 KRT79Q5XKE5 535 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 HSD3B7Q9H2F3 369 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 ZNF446Q9NWS9 450 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 TMOD4Q9NZQ9 345 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 COL20A1Q9P218 1284 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 CSADQ9Y600 493 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 FMR1Q06787 632 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 ECM1Q16610 540 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 ERCC6LQ2NKX8 1250 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 CATSPERGQ6ZRH7 1159 aa19.1■□□□□ 0.65
PCDHB17P-201ENST00000539533 RLFQ13129 1914 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 IGLV3-22A0A075B6J6 115 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 MSH4O15457 936 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 RPN1P04843 607 aaKnown RBP19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 CD44P16070 742 aaKnown RBP19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 H2AFXP16104 143 aaPredicted RBP19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 DSG3P32926 999 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 STAT3P40763 770 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 MYL5Q02045 173 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 COG2Q14746 738 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 SLFN12Q8IYM2 578 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 CLMNQ96JQ2 1002 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 CUEDC2Q9H467 287 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 BLOC1S4Q9NUP1 217 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 RIPK3Q9Y572 518 aa19.09■□□□□ 0.65
PCDHB17P-201ENST00000539533 ATP1A3P13637 1013 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 IREB2P48200 963 aaKnown RBP19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 CDK5RAP3Q96JB5 506 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 MED15Q96RN5 788 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 ELP3Q9H9T3 547 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 ZC3H4Q9UPT8 1303 aaKnown RBP19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 OTOFQ9HC10 1997 aa19.08■□□□□ 0.65
PCDHB17P-201ENST00000539533 TRMT44Q8IYL2 757 aaKnown RBP19.08■□□□□ 0.64
PCDHB17P-201ENST00000539533 REPS2Q8NFH8 660 aa19.08■□□□□ 0.64
PCDHB17P-201ENST00000539533 TRERF1Q96PN7 1200 aa19.08■□□□□ 0.64
PCDHB17P-201ENST00000539533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.64
PCDHB17P-201ENST00000539533 TBX3O15119 743 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 FDX1P10109 184 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 SPIRE1Q08AE8 756 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 SH3D19Q5HYK7 790 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 KCNK18Q7Z418 384 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 MCF2L2Q86YR7 1114 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 DACH1Q9UI36 760 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 ADAMTS5Q9UNA0 930 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 PAPPA2Q9BXP8 1791 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 CCP110O43303 1012 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 SLC30A10Q6XR72 485 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 FANCLQ9NW38 375 aa19.07■□□□□ 0.64
PCDHB17P-201ENST00000539533 COL11A1P12107 1806 aaPredicted RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 PPP1R3GB7ZBB8 358 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 KLRC4O43908 158 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 CDK11BP21127 795 aaKnown RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 NF2P35240 595 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 ETF1P62495 437 aaKnown RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 RPS6P62753 249 aaKnown RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 MCM6Q14566 821 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 TREML2Q5T2D2 321 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 KLHL10Q6JEL2 608 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 FAM20AQ96MK3 541 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 TRIM9Q9C026 710 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 EHMT1Q9H9B1 1298 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 MAGEF1Q9HAY2 307 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 WDR90Q96KV7 1748 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 IQCA1LA6NCM1 817 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 IRF6O14896 467 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 CCT6AP40227 531 aaKnown RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 IRX5P78411 483 aaPredicted RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 TMEM132BQ14DG7 1078 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 TMEM119Q4V9L6 283 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 SYTL5Q8TDW5 730 aaPredicted RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 OTUD5Q96G74 571 aa19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
PCDHB17P-201ENST00000539533 ERICH4A6NGS2 130 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 MYL1P05976 194 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 UBASH3AP57075 661 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 GHRHRQ02643 423 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 CEP55Q53EZ4 464 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 SNRNP48Q6IEG0 339 aaKnown RBP19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 LARP4BQ92615 738 aaKnown RBP19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 STK17AQ9UEE5 414 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 GDAQ9Y2T3 454 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 PHLPP2Q6ZVD8 1323 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms