RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SYT2Q8N9I0 419 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EHBP1Q8NDI1 1231 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DEPTORQ8TB45 409 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LPIN2Q92539 896 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 APPBP2Q92624 585 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LRRC2Q9BYS8 371 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 INIPQ9NRY2 104 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RABL2AQ9UBK7 228 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 KIF4AO95239 1232 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TNFRSF8P28908 595 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PHKA1P46020 1223 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EXOSC10Q01780 885 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EIF2B5Q13144 721 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RCN1Q15293 331 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 INAQ16352 499 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GLE1Q53GS7 698 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RNF187Q5TA31 235 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LARP1BQ659C4 914 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCNI2Q6ZMN8 369 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PTF1AQ7RTS3 328 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 VSTM4Q8IW00 320 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PPP1R14CQ8TAE6 165 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AGAP11Q8TF27 550 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BRF1Q92994 677 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TIPINQ9BVW5 301 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZCWPW1Q9H0M4 648 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RABEP2Q9H5N1 569 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BCORQ6W2J9 1755 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AKAP11Q9UKA4 1901 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 VPS37CA5D8V6 355 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CLASP2O75122 1294 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MSL3P1P0C860 447 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CPA3P15088 417 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ATP6V1C1P21283 382 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FECHP22830 423 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 VARSP26640 1264 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ADD2P35612 726 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CSE1LP55060 971 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 KCNQ4P56696 695 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MRPS25P82663 173 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NNTQ13423 1086 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NCAPHQ15003 741 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TTF1Q15361 905 aaPredicted RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC152Q4G0S7 254 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TTMPQ5BVD1 217 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC148Q8NFR7 591 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PGBD1Q96JS3 809 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SYT15Q9BQS2 421 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 OSBPL10Q9BXB5 764 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EIF2AQ9BY44 585 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.32□□□□□ -1.48e-10■■■■□ 19.7
RAB3GAP1-207ENST00000539493 PUF60Q9UHX1 559 aaKnown RBP6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TBC1D30Q9Y2I9 924 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ARAP2Q8WZ64 1704 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RTL9Q8NET4 1388 aa6.32□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LAMB2P55268 1798 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ATRNO75882 1429 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SNAP23O00161 211 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SART1O43290 800 aaKnown RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GPAA1O43292 621 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 STRNO43815 780 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RAD21O60216 631 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DIAPH2O60879 1101 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FGAP02671 866 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ACADSP16219 412 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GNAZP19086 355 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDCP20941 246 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MLH1P40692 756 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ACADVLP49748 655 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GEMIN4P57678 1058 aaKnown RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CFAP157Q5JU67 520 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC9C2Q5TAH2 1124 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TMEM53Q6P2H8 277 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LMNTD2Q8IXW0 634 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC7A5P1Q8MH63 180 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 WDR66Q8TBY9 1149 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 USP33Q8TEY7 942 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SELENOOQ9BVL4 669 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PIH1D3Q9NQM4 214 aaKnown RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MTMR7Q9Y216 660 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LAMA4Q16363 1823 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 JAK2O60674 1132 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 UQCRFS1P1P0C7P4 283 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MYCLP1P12525 358 aaPredicted RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ENPP1P22413 925 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HOXD11P31277 338 aaPredicted RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MDH1P40925 334 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms