RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC39A5Q6ZMH5 540 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 BLIDQ8IZY5 108 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 UIMC1Q96RL1 719 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 TSEN34Q9BSV6 310 aaKnown RBP18.01■□□□□ 0.47
RPAIN-206ENST00000539417 GLT8D2Q9H1C3 349 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 SPC25Q9HBM1 224 aa18.01■□□□□ 0.47
RPAIN-206ENST00000539417 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
RPAIN-206ENST00000539417 NKRFO15226 690 aaKnown RBP eCLIP18■□□□□ 0.47
RPAIN-206ENST00000539417 GGPS1O95749 300 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 GH1P01241 217 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 ARP10275 920 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 PSMC6P62333 389 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 EARS2Q5JPH6 523 aaKnown RBP18■□□□□ 0.47
RPAIN-206ENST00000539417 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 XRRA1Q6P2D8 792 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 DAGLBQ8NCG7 672 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 DPF3Q92784 378 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 PKD2L1Q9P0L9 805 aa18■□□□□ 0.47
RPAIN-206ENST00000539417 GRIN2DO15399 1336 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 MOXD2PA6NHM9 499 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 A6NJR5 290 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 FAM86B1E9PN63 330 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 STAM2O75886 525 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 FAM86B2P0C5J1 330 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 GUCY1B3Q02153 619 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
RPAIN-206ENST00000539417 MXRA8Q9BRK3 442 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 JADE2Q9NQC1 790 aa17.99■□□□□ 0.47
RPAIN-206ENST00000539417 FIBPO43427 364 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 MMP3P08254 477 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 MYL3P08590 195 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 KCNA2P16389 499 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 GNPTABQ3T906 1256 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 TRIM60Q495X7 471 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 TEX2Q8IWB9 1127 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 DHX37Q8IY37 1157 aaKnown RBP17.98■□□□□ 0.47
RPAIN-206ENST00000539417 PCSK9Q8NBP7 692 aaKnown RBP17.98■□□□□ 0.47
RPAIN-206ENST00000539417 BICD2Q8TD16 824 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 LLPHQ9BRT6 129 aaKnown RBP17.98■□□□□ 0.47
RPAIN-206ENST00000539417 HTATIP2Q9BUP3 242 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 EHMT1Q9H9B1 1298 aa17.98■□□□□ 0.47
RPAIN-206ENST00000539417 IGLV3-22A0A075B6J6 115 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 CYP3A4P08684 503 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 TGFB3P10600 412 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 RTP1P59025 263 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 PURAQ00577 322 aaKnown RBP17.97■□□□□ 0.47
RPAIN-206ENST00000539417 NR5A1Q13285 461 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 MTMR1Q13613 665 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 SNX17Q15036 470 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 CYFIP1Q7L576 1253 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 NLRX1Q86UT6 975 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 EMID1Q96A84 441 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-206ENST00000539417 GPRASP2Q96D09 838 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 STARD7Q9NQZ5 370 aa17.97■□□□□ 0.47
RPAIN-206ENST00000539417 MEIS1O00470 390 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 CPT1AP50416 773 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 CEP55Q53EZ4 464 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 KRT40Q6A162 431 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 KCNV1Q6PIU1 500 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 TBCKQ8TEA7 893 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 WASF1Q92558 559 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 TNFRSF25Q93038 417 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 KCNH7Q9NS40 1196 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 PDE4DIPQ5VU43 2346 aa17.96■□□□□ 0.47
RPAIN-206ENST00000539417 SP4Q02446 784 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 ITGB3BPQ13352 177 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-206ENST00000539417 LAMC2Q13753 1193 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 KAT2BQ92831 832 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 LENG9Q96B70 501 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 GLT1D1Q96MS3 346 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 SPATA33Q96N06 139 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 MLXIPQ9HAP2 919 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 AGO4Q9HCK5 861 aaKnown RBP17.95■□□□□ 0.46
RPAIN-206ENST00000539417 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 EVI5O60447 810 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 ZNF286BP0CG31 522 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 ZNF76P36508 570 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 CDK7P50613 346 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 INF2Q27J81 1249 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 GALNT17Q6IS24 598 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-206ENST00000539417 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 GJA10Q969M2 543 aa17.95■□□□□ 0.46
RPAIN-206ENST00000539417 H0YGN5 161 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 RBAK-RBAKDNI3L0D1 243 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 TDP2O95551 362 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 MMP1P03956 469 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 SYN1P17600 705 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 XBP1P17861 261 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 CIITAP33076 1130 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 MCM2P49736 904 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 TLE2Q04725 743 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 METTL7BQ6UX53 244 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 PIK3AP1Q6ZUJ8 805 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms