RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PIGSQ96S52 555 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 SPZ1Q9BXG8 430 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 FTOQ9C0B1 505 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDB1-212ENST00000538470 THEGQ9P2T0 379 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 PRRC2BQ5JSZ5 2229 aaKnown RBP10.01□□□□□ -0.81
DDB1-212ENST00000538470 EFCAB14O75071 495 aa10□□□□□ -0.81
DDB1-212ENST00000538470 PPFIA4O75335 1185 aa10□□□□□ -0.81
DDB1-212ENST00000538470 GGPS1O95749 300 aa10□□□□□ -0.81
DDB1-212ENST00000538470 CXCL10P02778 98 aa10□□□□□ -0.81
DDB1-212ENST00000538470 ZNF286BP0CG31 522 aa10□□□□□ -0.81
DDB1-212ENST00000538470 MYCLP12524 364 aaPredicted RBP10□□□□□ -0.81
DDB1-212ENST00000538470 SMARCA1P28370 1054 aa10□□□□□ -0.81
DDB1-212ENST00000538470 HOXA13P31271 388 aaPredicted RBP10□□□□□ -0.81
DDB1-212ENST00000538470 KIF5BP33176 963 aa10□□□□□ -0.81
DDB1-212ENST00000538470 KCNJ6P48051 423 aa10□□□□□ -0.81
DDB1-212ENST00000538470 RABGGTBP53611 331 aa10□□□□□ -0.81
DDB1-212ENST00000538470 ANTXR2P58335 489 aa10□□□□□ -0.81
DDB1-212ENST00000538470 CHMP4BP1P59074 171 aa10□□□□□ -0.81
DDB1-212ENST00000538470 ADGRE1Q14246 886 aa10□□□□□ -0.81
DDB1-212ENST00000538470 KIAA0753Q2KHM9 967 aa10□□□□□ -0.81
DDB1-212ENST00000538470 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
DDB1-212ENST00000538470 CNKSR3Q6P9H4 555 aa10□□□□□ -0.81
DDB1-212ENST00000538470 CASC1Q6TDU7 716 aa10□□□□□ -0.81
DDB1-212ENST00000538470 IL31RAQ8NI17 732 aa10□□□□□ -0.81
DDB1-212ENST00000538470 ATXN2LQ8WWM7 1075 aaKnown RBP10□□□□□ -0.81
DDB1-212ENST00000538470 DHX38Q92620 1227 aaKnown RBP10□□□□□ -0.81
DDB1-212ENST00000538470 TMEM87BQ96K49 555 aa10□□□□□ -0.81
DDB1-212ENST00000538470 INPP4AQ96PE3 977 aaPredicted RBP10□□□□□ -0.81
DDB1-212ENST00000538470 LZTS2Q9BRK4 669 aa10□□□□□ -0.81
DDB1-212ENST00000538470 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
DDB1-212ENST00000538470 RBM8AQ9Y5S9 174 aaKnown RBP10□□□□□ -0.81
DDB1-212ENST00000538470 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 CA3P07451 260 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 CALM1P0DP23 149 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 CALM2P0DP24 149 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 CALM3P0DP25 149 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 CKBP12277 381 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 ICAM3P32942 547 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 MCM5P33992 734 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 GNAQP50148 359 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 HERC6Q8IVU3 1022 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 ZNF654Q8IZM8 581 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 TMTC2Q8N394 836 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 IGDCC4Q8TDY8 1250 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 PPP1R13LQ8WUF5 828 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 RRP36Q96EU6 259 aaKnown RBP9.99□□□□□ -0.81
DDB1-212ENST00000538470 SPATA33Q96N06 139 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
DDB1-212ENST00000538470 LY9Q9HBG7 655 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 SENP2Q9HC62 589 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
DDB1-212ENST00000538470 TAF6LQ9Y6J9 622 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 EMSYQ7Z589 1322 aa9.99□□□□□ -0.81
DDB1-212ENST00000538470 RALGAPA2Q2PPJ7 1873 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 ABHD14A-ACY1A0A1B0GW23 586 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 NOP56O00567 594 aaKnown RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 SH2B2O14492 632 aaPredicted RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 FIBPO43427 364 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 PRC1O43663 620 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 CAND2O75155 1236 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 POU3F3P20264 500 aaPredicted RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 IGFBP4P22692 258 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 HOXC8P31273 242 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 WDR5P61964 334 aaKnown RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 NEDD9Q14511 834 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 METTL7BQ6UX53 244 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 CUL5Q93034 780 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 LSG1Q9H089 658 aaKnown RBP9.98□□□□□ -0.81
DDB1-212ENST00000538470 MLXIPQ9HAP2 919 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 BRWD1Q9NSI6 2320 aa9.98□□□□□ -0.81
DDB1-212ENST00000538470 CCDC69A6NI79 296 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
DDB1-212ENST00000538470 TLL1O43897 1013 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 LGALS2P05162 132 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 MYOGP15173 224 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 LIFRP42702 1097 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 SP2Q02086 613 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 TAP1Q03518 808 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 GPNMBQ14956 572 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 PCNX4Q63HM2 1172 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 SERINC5Q86VE9 423 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 TEX2Q8IWB9 1127 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 GIMAP8Q8ND71 665 aaPredicted RBP9.97□□□□□ -0.81
DDB1-212ENST00000538470 SMARCC2Q8TAQ2 1214 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 SENP7Q9BQF6 1050 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 USP26Q9BXU7 913 aa9.97□□□□□ -0.81
DDB1-212ENST00000538470 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
DDB1-212ENST00000538470 BDP1A6H8Y1 2624 aa9.96□□□□□ -0.81
DDB1-212ENST00000538470 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms