RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DNM2P50570 870 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 FKBP1AP62942 108 aaKnown RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 POTEBQ6S5H4 581 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 THNSL1Q8IYQ7 743 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 JAKMIP2Q96AA8 810 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 KCNH7Q9NS40 1196 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 DNM3Q9UQ16 869 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 C5P01031 1676 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 OFD1O75665 1012 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 GJB1P08034 283 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 ACRP10323 421 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 NCBP1Q09161 790 aaKnown RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 ACVR2BQ13705 512 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 PFKFB3Q16875 520 aaPredicted RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 KIZQ2M2Z5 673 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 CEP55Q53EZ4 464 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 CABP7Q86V35 215 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SMYD4Q8IYR2 804 aaPredicted RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 TM6SF1Q9BZW5 370 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 TMEM39AQ9NV64 488 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 FAM184BQ9ULE4 1060 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 ASB14A6NK59 587 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 E9PMD0 336 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 EVI5O60447 810 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 CCND3P30281 292 aaPredicted RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 CLCN3P51790 818 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 MKRN4PQ13434 485 aaPredicted RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 TWF2Q6IBS0 349 aaKnown RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 TLK2Q86UE8 772 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SIAH1Q8IUQ4 282 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 ATP6V0A1Q93050 837 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 HPS3Q969F9 1004 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 DYDC2Q96IM9 177 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 KIFC3Q9BVG8 833 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 PCIF1Q9H4Z3 704 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 HOOK1Q9UJC3 728 aaKnown RBP8.1□□□□□ -1.11
MSH6-209ENST00000538136 NUP98P52948 1817 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 BRWD1Q9NSI6 2320 aa8.1□□□□□ -1.11
MSH6-209ENST00000538136 KIF28PB7ZC32 967 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GADD45BO75293 160 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 SMC2O95347 1197 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GCNT3O95395 438 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 SLC25A27O95847 323 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 ABL1P00519 1130 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 EN2P19622 333 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 STAT5BP51692 787 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 ARID5AQ03989 594 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 SEC23AQ15436 765 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 DEPTORQ8TB45 409 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 BARHL2Q9NY43 387 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 ERLIN2O94905 339 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 OR52Z1P0C646 297 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 SPAG1Q07617 926 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 MAP2K5Q13163 448 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 KIAA0753Q2KHM9 967 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 USP49Q70CQ1 688 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GPBP1Q86WP2 473 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 SPC24Q8NBT2 197 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 MRIQ9BWK5 157 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GDAQ9Y2T3 454 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 CHD4Q14839 1912 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GOLGA8IPA6NC78 632 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 GOLGA8JA6NMD2 632 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 PRPF3O43395 683 aaKnown RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 ATP9AO75110 1047 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 VTNP04004 478 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 TCF7P36402 384 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 BIRC3Q13489 604 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 OTOP1Q7RTM1 612 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 CATSPER4Q7RTX7 472 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 SYAP1Q96A49 352 aaPredicted RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 SLC38A10Q9HBR0 1119 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
MSH6-209ENST00000538136 MARF1Q9Y4F3 1742 aaKnown RBP8.09□□□□□ -1.11
MSH6-209ENST00000538136 C2CD2LO14523 706 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 GHRP10912 638 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MAP2K2P36507 400 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 CYP2J2P51589 502 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 PEX3P56589 373 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 LRMPQ12912 555 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 PPFIA1Q13136 1202 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 FAM110CQ1W6H9 321 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 RILPL1Q5EBL4 403 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 EARS2Q5JPH6 523 aaKnown RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 LBX2Q6XYB7 198 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms