RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
TCHP-205ENST00000537880 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
TCHP-205ENST00000537880 ATXN2Q99700 1313 aaKnown RBP12.26□□□□□ -0.45
TCHP-205ENST00000537880 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
TCHP-205ENST00000537880 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
TCHP-205ENST00000537880 CAP2P40123 477 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 RWDD2BP57060 319 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 ABCB5Q2M3G0 1257 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 TMTC3Q6ZXV5 915 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 ABL1P00519 1130 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 PDCLQ13371 301 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 ZNF513Q8N8E2 541 aaPredicted RBP12.25□□□□□ -0.45
TCHP-205ENST00000537880 KANSL2Q9H9L4 492 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 ZBTB21Q9ULJ3 1066 aa12.25□□□□□ -0.45
TCHP-205ENST00000537880 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 EZRP15311 586 aaKnown RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 SMARCA1P28370 1054 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 GBP2P32456 591 aaPredicted RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 TUBB4BP68371 445 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 MYL5Q02045 173 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 ICA1Q05084 483 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 PSMD2Q13200 908 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 SNCBQ16143 134 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 SLC35G1Q2M3R5 365 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 SYNE3Q6ZMZ3 975 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 GMCL1P1Q8NEA9 526 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 HOOK2Q96ED9 719 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
TCHP-205ENST00000537880 CDKL5O76039 1030 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 SNUPNO95149 360 aaKnown RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 TUBBP07437 444 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 CDR1P51861 262 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 KCNB1Q14721 858 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 ADGRG1Q9Y653 693 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 RPS6KA3P51812 740 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 SEPT2Q15019 361 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 CLEC10AQ8IUN9 316 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 FAM210AQ96ND0 272 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 SH3GL2Q99962 352 aa12.24□□□□□ -0.45
TCHP-205ENST00000537880 RNF26Q9BY78 433 aaPredicted RBP12.24□□□□□ -0.45
TCHP-205ENST00000537880 GOLGA6BA6NDN3 693 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 GDF11O95390 407 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 GH2P01242 217 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 WHAMMP3Q1A5X7 153 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 CDCA2Q69YH5 1023 aaPredicted RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 ADALQ6DHV7 355 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 CTNND1O60716 968 aaKnown RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 PLEKHA8P1O95397 391 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 SRBD1Q8N5C6 995 aaKnown RBP12.23□□□□□ -0.45
TCHP-205ENST00000537880 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 ZNF341Q9BYN7 854 aa12.23□□□□□ -0.45
TCHP-205ENST00000537880 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
TCHP-205ENST00000537880 TRAF1Q13077 416 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 PKN1Q16512 942 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 ACCSLQ4AC99 568 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 SPECC1LQ69YQ0 1117 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 CYB5D1Q6P9G0 228 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 TPX2Q9ULW0 747 aaKnown RBP12.22□□□□□ -0.45
TCHP-205ENST00000537880 ZEB2O60315 1214 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 KIF5BP33176 963 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 USP14P54578 494 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
TCHP-205ENST00000537880 GMCL1Q96IK5 515 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 NAPGQ99747 312 aaPredicted RBP12.22□□□□□ -0.45
TCHP-205ENST00000537880 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 STX8Q9UNK0 236 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
TCHP-205ENST00000537880 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
TCHP-205ENST00000537880 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 PECAM1P16284 738 aaPredicted RBP12.21□□□□□ -0.45
TCHP-205ENST00000537880 NAP1L1P55209 391 aaKnown RBP12.21□□□□□ -0.45
TCHP-205ENST00000537880 TUBB2AQ13885 445 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 TUBB2BQ9BVA1 445 aa12.21□□□□□ -0.45
TCHP-205ENST00000537880 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.46
TCHP-205ENST00000537880 GNAQP50148 359 aa12.21□□□□□ -0.46
TCHP-205ENST00000537880 ZNF543Q08ER8 600 aa12.21□□□□□ -0.46
TCHP-205ENST00000537880 IFT88Q13099 833 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms