RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 NASPP49321 788 aaPredicted RBP27.48■■□□□ 1.99
HMGA2-208ENST00000537429 CEBPZQ03701 1054 aaKnown RBP27.48■■□□□ 1.99
HMGA2-208ENST00000537429 SEMA3FQ13275 785 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 ACVR2BQ13705 512 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 MFSD14CQ5VZR4 134 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 TAPT1Q6NXT6 567 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 SEPT14Q6ZU15 432 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 TMEM60Q9H2L4 133 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 KCNMB3Q9NPA1 279 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 CNPY2Q9Y2B0 182 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 PTCH2Q9Y6C5 1203 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 CENPFP49454 3210 aa27.48■■□□□ 1.99
HMGA2-208ENST00000537429 SPATA31C2B4DYI2 1134 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 KRT85P78386 507 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 PTGDRQ13258 359 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 PTPAQ15257 358 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 CDHR1Q96JP9 859 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 CEP131Q9UPN4 1083 aa27.47■■□□□ 1.99
HMGA2-208ENST00000537429 RBM47A0AV96 593 aaKnown RBP27.46■■□□□ 1.99
HMGA2-208ENST00000537429 MSH4O15457 936 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 BMP15O95972 392 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 PRAMEF19Q5SWL8 479 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 SLAIN1Q8ND83 568 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 ETNPPLQ8TBG4 499 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 MTMR9Q96QG7 549 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 PDGFCQ9NRA1 345 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 TCHHQ07283 1943 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 TBX3O15119 743 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 ZNF865P0CJ78 1059 aaPredicted RBP27.46■■□□□ 1.99
HMGA2-208ENST00000537429 TGFB3P10600 412 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 ATP2C1P98194 919 aaPredicted RBP27.46■■□□□ 1.99
HMGA2-208ENST00000537429 CALCRLQ16602 461 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 LINC00301Q8NCQ3 95 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 HAS1Q92839 578 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 AGO4Q9HCK5 861 aaKnown RBP27.46■■□□□ 1.99
HMGA2-208ENST00000537429 NRBP1Q9UHY1 535 aa27.46■■□□□ 1.99
HMGA2-208ENST00000537429 LAD1O00515 517 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 YEATS4O95619 227 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 HMGCRP04035 888 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 GRK4P32298 578 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 TRIM32Q13049 653 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 SLC39A14Q15043 492 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 CCDC62Q6P9F0 684 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 KCNV1Q6PIU1 500 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 SCFD2Q8WU76 684 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 FAM20AQ96MK3 541 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 ZHX1Q9UKY1 873 aaPredicted RBP27.45■■□□□ 1.98
HMGA2-208ENST00000537429 MRVI1Q9Y6F6 885 aa27.45■■□□□ 1.98
HMGA2-208ENST00000537429 ATP9AO75110 1047 aa27.44■■□□□ 1.98
HMGA2-208ENST00000537429 NCLP19338 710 aaKnown RBP27.44■■□□□ 1.98
HMGA2-208ENST00000537429 ZNF577Q9BSK1 485 aa27.44■■□□□ 1.98
HMGA2-208ENST00000537429 MORC2Q9Y6X9 1032 aaPredicted RBP27.44■■□□□ 1.98
HMGA2-208ENST00000537429 IPO5O00410 1097 aaKnown RBP27.43■■□□□ 1.98
HMGA2-208ENST00000537429 ARIH2O95376 493 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 OR52Z1P0C646 297 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 CYBAP13498 195 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 CACNB2Q08289 660 aaPredicted RBP27.43■■□□□ 1.98
HMGA2-208ENST00000537429 SLC5A5Q92911 643 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 SENP7Q9BQF6 1050 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 PRDM10Q9NQV6 1147 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 DDX41Q9UJV9 622 aaKnown RBP27.43■■□□□ 1.98
HMGA2-208ENST00000537429 RCOR1Q9UKL0 485 aa27.43■■□□□ 1.98
HMGA2-208ENST00000537429 KCNA2P16389 499 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 ADCYAP1R1P41586 468 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 SP2Q02086 613 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 TTLL4Q14679 1199 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 CCDC144BQ3MJ40 725 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 MAP3K21Q5TCX8 1036 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 CLEC17AQ6ZS10 378 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 SLFN12Q8IYM2 578 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 TRPV1Q8NER1 839 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 GJA10Q969M2 543 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 UIMC1Q96RL1 719 aa27.42■■□□□ 1.98
HMGA2-208ENST00000537429 BAG4O95429 457 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 PRPHP41219 470 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 ITGB3BPQ13352 177 aaPredicted RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 STK38Q15208 465 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 ARL6IP4Q66PJ3 421 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 IQSEC1Q6DN90 963 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 SCAND2PQ9GZW5 306 aaPredicted RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 DHX15O43143 795 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 TXNP10599 105 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 PRKAR2AP13861 404 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 PKN2Q16513 984 aaKnown RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 LY6KQ17RY6 165 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 LEO1Q8WVC0 666 aaPredicted RBP27.41■■□□□ 1.98
HMGA2-208ENST00000537429 RIT2Q99578 217 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 PKD2L1Q9P0L9 805 aa27.41■■□□□ 1.98
HMGA2-208ENST00000537429 SPTLC2O15270 562 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 MARCH6O60337 910 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 PSMD10O75832 226 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 UBA1P22314 1058 aaKnown RBP27.4■■□□□ 1.98
HMGA2-208ENST00000537429 TXKP42681 527 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 SLC9C1Q4G0N8 1177 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 TMEM63BQ5T3F8 832 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 SH3TC2Q8TF17 1288 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 SPATA32Q96LK8 384 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 TBC1D22BQ9NU19 505 aa27.4■■□□□ 1.98
HMGA2-208ENST00000537429 NFASCO94856 1347 aa27.39■■□□□ 1.98
HMGA2-208ENST00000537429 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms