RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 CUL5Q93034 780 aa11.37□□□□□ -0.59
CCDC170-202ENST00000537358 SPATA33Q96N06 139 aa11.37□□□□□ -0.59
CCDC170-202ENST00000537358 PIGSQ96S52 555 aa11.37□□□□□ -0.59
CCDC170-202ENST00000537358 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
CCDC170-202ENST00000537358 MLXIPQ9HAP2 919 aa11.37□□□□□ -0.59
CCDC170-202ENST00000537358 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
CCDC170-202ENST00000537358 YBX2Q9Y2T7 364 aaKnown RBP11.37□□□□□ -0.59
CCDC170-202ENST00000537358 PRUNE2Q8WUY3 3088 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 NOP56O00567 594 aaKnown RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 PPFIA4O75335 1185 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 STAM2O75886 525 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 GGPS1O95749 300 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 SELPP16109 830 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 GNAQP50148 359 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 PGM5Q15124 567 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 KIAA0753Q2KHM9 967 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 CELF3Q5SZQ8 465 aaKnown RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 LRRC8DQ7L1W4 858 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 VSIG10LQ86VR7 867 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 TMTC2Q8N394 836 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 MAP4K1Q92918 833 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 RRP36Q96EU6 259 aaKnown RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 THEGQ9P2T0 379 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 GTF2IRD1Q9UHL9 959 aa11.36□□□□□ -0.59
CCDC170-202ENST00000537358 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
CCDC170-202ENST00000537358 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 OPLAHO14841 1288 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 PPP1R11O60927 126 aaPredicted RBP11.35□□□□□ -0.59
CCDC170-202ENST00000537358 EFCAB14O75071 495 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 DDAH1O94760 285 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 F2P00734 622 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 ZNF286BP0CG31 522 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 MCM5P33992 734 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 TROAPQ12815 778 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 PTK7Q13308 1070 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 NEDD9Q14511 834 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 MYSM1Q5VVJ2 828 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 ATXN2LQ8WWM7 1075 aaKnown RBP11.35□□□□□ -0.59
CCDC170-202ENST00000537358 KAT2BQ92831 832 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 ZBED2Q9BTP6 218 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 KAT6AQ92794 2004 aa11.35□□□□□ -0.59
CCDC170-202ENST00000537358 TLL1O43897 1013 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CA3P07451 260 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CALM1P0DP23 149 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CALM2P0DP24 149 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CALM3P0DP25 149 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CKBP12277 381 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 MYOGP15173 224 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 SMARCA1P28370 1054 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CCDC85BQ15834 202 aaPredicted RBP11.34□□□□□ -0.59
CCDC170-202ENST00000537358 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
CCDC170-202ENST00000537358 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 TET1Q8NFU7 2136 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 PIBF1Q8WXW3 757 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
CCDC170-202ENST00000537358 ABHD14A-ACY1A0A1B0GW23 586 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 HAS3O00219 553 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 PRC1O43663 620 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 CYTH3O43739 400 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 SORBS3O60504 671 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 GNAT1P11488 350 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 HOXD8P13378 290 aaPredicted RBP11.33□□□□□ -0.6
CCDC170-202ENST00000537358 UBA1P22314 1058 aaKnown RBP11.33□□□□□ -0.6
CCDC170-202ENST00000537358 MRPS5P82675 430 aaKnown RBP11.33□□□□□ -0.6
CCDC170-202ENST00000537358 RBL2Q08999 1139 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 IKBKEQ14164 716 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 ADGRE1Q14246 886 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
CCDC170-202ENST00000537358 AAK1Q2M2I8 961 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 XRRA1Q6P2D8 792 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 SYNE3Q6ZMZ3 975 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 VWCEQ96DN2 955 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
CCDC170-202ENST00000537358 CHD9Q3L8U1 2897 aa11.33□□□□□ -0.6
CCDC170-202ENST00000537358 C17orf102A2RUQ5 167 aa11.32□□□□□ -0.6
CCDC170-202ENST00000537358 H3BRB1 525 aa11.32□□□□□ -0.6
CCDC170-202ENST00000537358 FIBPO43427 364 aa11.32□□□□□ -0.6
CCDC170-202ENST00000537358 RGS20O76081 388 aa11.32□□□□□ -0.6
CCDC170-202ENST00000537358 ANTXR2P58335 489 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms