RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 WNT8AQ9H1J5 351 aa9.67□□□□□ -0.86
DDB1-208ENST00000537120 LY9Q9HBG7 655 aa9.67□□□□□ -0.86
DDB1-208ENST00000537120 RTEL1Q9NZ71 1219 aa9.67□□□□□ -0.86
DDB1-208ENST00000537120 CXXC1Q9P0U4 656 aaPredicted RBP9.67□□□□□ -0.86
DDB1-208ENST00000537120 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 OPLAHO14841 1288 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 IQCF3P0C7M6 154 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 ATP2A2P16615 1042 aaKnown RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 RXRAP19793 462 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 IGFBP4P22692 258 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 RABGGTBP53611 331 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 MFSD10Q14728 455 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 KIAA0753Q2KHM9 967 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 BMP2KLQ5H9B9 411 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 GDF6Q6KF10 455 aaPredicted RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 NLRX1Q86UT6 975 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-208ENST00000537120 CMTR1Q8N1G2 835 aaKnown RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 PPTC7Q8NI37 304 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
DDB1-208ENST00000537120 CCDC136Q96JN2 1154 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 NEK1Q96PY6 1258 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 SPZ1Q9BXG8 430 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 PSTPIP2Q9H939 334 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 HDAC6Q9UBN7 1215 aa9.66□□□□□ -0.86
DDB1-208ENST00000537120 LRRC37A2A6NM11 1700 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 SH2B2O14492 632 aaPredicted RBP9.65□□□□□ -0.86
DDB1-208ENST00000537120 STAM2O75886 525 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 PLEKHA8P1O95397 391 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 ZNF286BP0CG31 522 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 LIFRP42702 1097 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 KCNJ6P48051 423 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 GHRHRQ02643 423 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 NEDD9Q14511 834 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 NECTIN1Q15223 517 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 SLC35G1Q2M3R5 365 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 UTP14CQ5TAP6 766 aaKnown RBP9.65□□□□□ -0.86
DDB1-208ENST00000537120 RASIP1Q5U651 963 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 USP17L6PQ6QN14 398 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 SRBD1Q8N5C6 995 aaKnown RBP9.65□□□□□ -0.86
DDB1-208ENST00000537120 FANCBQ8NB91 859 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 IL31RAQ8NI17 732 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 CAGE1Q8TC20 777 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 KAT2BQ92831 832 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 PRDM12Q9H4Q4 367 aa9.65□□□□□ -0.86
DDB1-208ENST00000537120 KIAA1217Q5T5P2 1943 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 SPDYE3A6NKU9 549 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 CDC45O75419 566 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 PARNO95453 639 aaKnown RBP9.64□□□□□ -0.87
DDB1-208ENST00000537120 SELPP16109 830 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 SP2Q02086 613 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 SP4Q02446 784 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 KRT32Q14532 448 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 HSDL1Q3SXM5 330 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 XRRA1Q6P2D8 792 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 LRRC8DQ7L1W4 858 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 HEATR3Q7Z4Q2 680 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 SESTD1Q86VW0 696 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
DDB1-208ENST00000537120 AFAP1L1Q8TED9 768 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 EHMT1Q9H9B1 1298 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 PCDHA11Q9Y5I1 949 aa9.64□□□□□ -0.87
DDB1-208ENST00000537120 TRIP12Q14669 1992 aaPredicted RBP9.64□□□□□ -0.87
DDB1-208ENST00000537120 C17orf102A2RUQ5 167 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 H3BRB1 525 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 ZBTB43O43298 467 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 FIBPO43427 364 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 RGS20O76081 388 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 NEFLP07196 543 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 GNAT1P11488 350 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 MYOGP15173 224 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 UBA1P22314 1058 aaKnown RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 ZNF200P98182 395 aaPredicted RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 PTK7Q13308 1070 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 DHX32Q7L7V1 743 aaKnown RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 PHOSPHO2Q8TCD6 241 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
DDB1-208ENST00000537120 ATP6V0A1Q93050 837 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 TUT1Q9H6E5 874 aaKnown RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 RBM28Q9NW13 759 aaKnown RBP9.63□□□□□ -0.87
DDB1-208ENST00000537120 A0A0C4DFX4 3053 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 SCN10AQ9Y5Y9 1956 aa9.63□□□□□ -0.87
DDB1-208ENST00000537120 LAMA2P24043 3122 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms