RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
UBC-204ENST00000536661 SNX14Q9Y5W7 946 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 GOLGA8BA8MQT2 603 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 STAM2O75886 525 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 F2P00734 622 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
UBC-204ENST00000536661 TGFB3P10600 412 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
UBC-204ENST00000536661 SEMA3FQ13275 785 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 GNPTABQ3T906 1256 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
UBC-204ENST00000536661 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 VWCEQ96DN2 955 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 SPATA33Q96N06 139 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
UBC-204ENST00000536661 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.35
UBC-204ENST00000536661 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
UBC-204ENST00000536661 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
UBC-204ENST00000536661 HAS3O00219 553 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 ICAM3P32942 547 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 PSEN2P49810 448 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 FUT2Q10981 343 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 MFSD10Q14728 455 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 UBE2SQ16763 222 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 PCNX4Q63HM2 1172 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 HERVK_113Q902F9 699 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 CDX2Q99626 313 aaPredicted RBP17.2■□□□□ 0.34
UBC-204ENST00000536661 ALG1Q9BT22 464 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 KATNAL1Q9BW62 490 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 PSTPIP2Q9H939 334 aa17.2■□□□□ 0.34
UBC-204ENST00000536661 CXXC1Q9P0U4 656 aaPredicted RBP17.2■□□□□ 0.34
UBC-204ENST00000536661 PTPRSQ13332 1948 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 PRUNE2Q8WUY3 3088 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 FIBPO43427 364 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 REC8O95072 547 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 FGBP02675 491 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 DNAJB2P25686 324 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 CDC27P30260 824 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 PTGISQ16647 500 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 Q6ZUG5 572 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
UBC-204ENST00000536661 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 NOD1Q9Y239 953 aa17.19■□□□□ 0.34
UBC-204ENST00000536661 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 PPFIA4O75335 1185 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 RCAN1P53805 252 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 FGD1P98174 961 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 APOBRQ0VD83 1088 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 KIAA0753Q2KHM9 967 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
UBC-204ENST00000536661 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
UBC-204ENST00000536661 IQCF3P0C7M6 154 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 PBX2P40425 430 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 NAPAP54920 295 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 BFSP2Q13515 415 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 NEDD9Q14511 834 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 METTL7BQ6UX53 244 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 DEFB128Q7Z7B8 93 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 RPUSD2Q8IZ73 545 aaKnown RBP17.17■□□□□ 0.34
UBC-204ENST00000536661 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
UBC-204ENST00000536661 BRF1Q92994 677 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 C16orf70Q9BSU1 422 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 MTIF3Q9H2K0 278 aaKnown RBP17.17■□□□□ 0.34
UBC-204ENST00000536661 TELO2Q9Y4R8 837 aa17.17■□□□□ 0.34
UBC-204ENST00000536661 NID2Q14112 1375 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 TMEM265A0A087WTH1 108 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 STXBP3O00186 592 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
UBC-204ENST00000536661 LGALS2P05162 132 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 PFKMP08237 780 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.342e-21■□□□□ 11
UBC-204ENST00000536661 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 PBX4Q9BYU1 374 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
UBC-204ENST00000536661 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
UBC-204ENST00000536661 ITGB5P18084 799 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms