RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ERMNQ8TAM6 284 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 SLC38A10Q9HBR0 1119 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 TAB2Q9NYJ8 693 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 ITIH6Q6UXX5 1313 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 E9PMD0 336 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 PLA2G4BP0C869 781 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 EEF1GP26641 437 aaKnown RBP25.34■■□□□ 1.65
HMGA2-206ENST00000536545 USP14P54578 494 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 CLEC4DQ8WXI8 215 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 TANGO6Q9C0B7 1094 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 SLC39A2Q9NP94 309 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 PPP1R9AQ9ULJ8 1098 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 PPP2R3BQ9Y5P8 575 aa25.34■■□□□ 1.65
HMGA2-206ENST00000536545 POTEFA5A3E0 1075 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 POTEIP0CG38 1075 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 E4F1Q66K89 784 aaPredicted RBP25.33■■□□□ 1.65
HMGA2-206ENST00000536545 POTEGQ6S5H5 508 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 POTEEQ6S8J3 1075 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 WRNIP1Q96S55 665 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 SPON1Q9HCB6 807 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 PHIPQ8WWQ0 1821 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 SPATA31C1P0DKV0 1188 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 RPA1P27694 616 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 PSMD2Q13200 908 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 CATSPER3Q86XQ3 398 aa25.33■■□□□ 1.65
HMGA2-206ENST00000536545 C16orf45Q96MC5 204 aaPredicted RBP25.33■■□□□ 1.65
HMGA2-206ENST00000536545 RPTORQ8N122 1335 aa25.33■■□□□ 1.64
HMGA2-206ENST00000536545 N4BP3O15049 544 aa25.32■■□□□ 1.64
HMGA2-206ENST00000536545 HIRAP54198 1017 aaPredicted RBP25.32■■□□□ 1.64
HMGA2-206ENST00000536545 COASYQ13057 564 aa25.32■■□□□ 1.64
HMGA2-206ENST00000536545 PRAMEF18Q5VWM3 479 aa25.32■■□□□ 1.64
HMGA2-206ENST00000536545 ANKRD40Q6AI12 368 aa25.32■■□□□ 1.64
HMGA2-206ENST00000536545 GUF1Q8N442 669 aaKnown RBP25.32■■□□□ 1.64
HMGA2-206ENST00000536545 SLC5A5Q92911 643 aa25.32■■□□□ 1.64
HMGA2-206ENST00000536545 SRRTQ9BXP5 876 aaKnown RBP25.32■■□□□ 1.64
HMGA2-206ENST00000536545 RPAP3Q9H6T3 665 aaPredicted RBP25.32■■□□□ 1.64
HMGA2-206ENST00000536545 NFIBO00712 420 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 IDEP14735 1019 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 PTPRAP18433 802 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 EPS15P42566 896 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 SLC12A3P55017 1021 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 BACE1P56817 501 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 SPP2Q13103 211 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 CENPPQ6IPU0 288 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 NYAP1Q6ZVC0 841 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 GPBP1Q86WP2 473 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 CSGALNACT2Q8N6G5 542 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 ZKSCAN4Q969J2 545 aaPredicted RBP25.31■■□□□ 1.64
HMGA2-206ENST00000536545 SEMA6BQ9H3T3 888 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 AS3MTQ9HBK9 375 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 FLOT1O75955 427 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 CYP11B2P19099 503 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 UBXN2AP68543 259 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 CEP55Q53EZ4 464 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 POLR3CQ9BUI4 534 aaPredicted RBP25.31■■□□□ 1.64
HMGA2-206ENST00000536545 VPS16Q9H269 839 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 PICK1Q9NRD5 415 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 COL20A1Q9P218 1284 aa25.31■■□□□ 1.64
HMGA2-206ENST00000536545 LGALS16A8MUM7 142 aa25.3■■□□□ 1.64
HMGA2-206ENST00000536545 PSMD10O75832 226 aa25.3■■□□□ 1.64
HMGA2-206ENST00000536545 SSBP05455 408 aaKnown RBP eCLIP25.3■■□□□ 1.64
HMGA2-206ENST00000536545 SETQ01105 290 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-206ENST00000536545 ZNF280CQ8ND82 737 aa25.3■■□□□ 1.64
HMGA2-206ENST00000536545 PRIMPOLQ96LW4 560 aa25.3■■□□□ 1.64
HMGA2-206ENST00000536545 RABGAP1Q9Y3P9 1069 aa25.3■■□□□ 1.64
HMGA2-206ENST00000536545 EML1O00423 815 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 ADKP55263 362 aaKnown RBP25.29■■□□□ 1.64
HMGA2-206ENST00000536545 PPP2R5CQ13362 524 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 MCF2L2Q86YR7 1114 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 C12orf42Q96LP6 360 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 FHDC1Q9C0D6 1143 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-206ENST00000536545 RAVER2Q9HCJ3 691 aaKnown RBP25.29■■□□□ 1.64
HMGA2-206ENST00000536545 BMP2KQ9NSY1 1161 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-206ENST00000536545 PANK4Q9NVE7 773 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 RLFQ13129 1914 aa25.29■■□□□ 1.64
HMGA2-206ENST00000536545 FRMD3A2A2Y4 597 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 AKR1B15C9JRZ8 316 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 MEIS1O00470 390 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 LRCH2Q5VUJ6 765 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 FOXR2Q6PJQ5 311 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 KLRG1Q96E93 195 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 PANX2Q96RD6 677 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 EIF2AK1Q9BQI3 630 aaKnown RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 TRMT1Q9NXH9 659 aaKnown RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 MAGEC2Q9UBF1 373 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 FZD1Q9UP38 647 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 FRMPD4Q14CM0 1322 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 ARHGAP6O43182 974 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 TNNT1P13805 278 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 NOL9Q5SY16 702 aaKnown RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 CEP135Q66GS9 1140 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 OTOP1Q7RTM1 612 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 PPFIBP1Q86W92 1011 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 FAM114A1Q8IWE2 563 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 PPP1R13BQ96KQ4 1090 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 BAG1Q99933 345 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-206ENST00000536545 PITPNM2Q9BZ72 1349 aa25.28■■□□□ 1.64
HMGA2-206ENST00000536545 MFAP3LO75121 409 aa25.27■■□□□ 1.64
HMGA2-206ENST00000536545 GYPCP04921 128 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms