RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PRRC2BQ5JSZ5 2229 aaKnown RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 EPOPA6NHQ4 379 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 ARHGEF15O94989 841 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 GH1P01241 217 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 MMP3P08254 477 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 HMGB1P09429 215 aaKnown RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 COL9A1P20849 921 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 HSPA4P34932 840 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 TFF2Q03403 129 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 ARHGAP1Q07960 439 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 SKIV2LQ15477 1246 aaKnown RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 GDF6Q6KF10 455 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 HERC6Q8IVU3 1022 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 CTCFLQ8NI51 663 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 NSUN6Q8TEA1 469 aaKnown RBP14.4□□□□□ -0.1
PRKDC-207ENST00000536483 ARNTL2Q8WYA1 636 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 PIGSQ96S52 555 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 MTCH2Q9Y6C9 303 aa14.4□□□□□ -0.1
PRKDC-207ENST00000536483 TET1Q8NFU7 2136 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 GTPBP6O43824 516 aaPredicted RBP14.39□□□□□ -0.11
PRKDC-207ENST00000536483 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
PRKDC-207ENST00000536483 REC8O95072 547 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 POU3F3P20264 500 aaPredicted RBP14.39□□□□□ -0.11
PRKDC-207ENST00000536483 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
PRKDC-207ENST00000536483 RCAN1P53805 252 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 TAP1Q03518 808 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 STXBP2Q15833 593 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 KRT40Q6A162 431 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 KAT2BQ92831 832 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 NECAB3Q96P71 396 aaPredicted RBP14.39□□□□□ -0.11
PRKDC-207ENST00000536483 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
PRKDC-207ENST00000536483 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 BMP1P13497 986 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
PRKDC-207ENST00000536483 GPNMBQ14956 572 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 ADCK5Q3MIX3 580 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 ARHGEF16Q5VV41 709 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 SESTD1Q86VW0 696 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 FANCBQ8NB91 859 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 CAGE1Q8TC20 777 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 AFAP1L1Q8TED9 768 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 DDX41Q9UJV9 622 aaKnown RBP14.38□□□□□ -0.11
PRKDC-207ENST00000536483 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 TRANK1O15050 2925 aa14.38□□□□□ -0.11
PRKDC-207ENST00000536483 TRIP12Q14669 1992 aaPredicted RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 TCF20Q9UGU0 1960 aaKnown RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 TLL1O43897 1013 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 BAIAP3O94812 1187 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 SELPP16109 830 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 KCNJ6P48051 423 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 KCNQ1P51787 676 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 SRBD1Q8N5C6 995 aaKnown RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
PRKDC-207ENST00000536483 AGXT2Q9BYV1 514 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 PXMP2Q9NR77 195 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 RAPGEFL1Q9UHV5 662 aa14.37□□□□□ -0.11
PRKDC-207ENST00000536483 TANC1Q9C0D5 1861 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 CFBP00751 764 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 NR3C2P08235 984 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
PRKDC-207ENST00000536483 DGKDQ16760 1214 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 VSIG10LQ86VR7 867 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 RRP36Q96EU6 259 aaKnown RBP14.36□□□□□ -0.11
PRKDC-207ENST00000536483 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 ALG1Q9BT22 464 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 MYL10Q9BUA6 226 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 SNX14Q9Y5W7 946 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 MRVI1Q9Y6F6 885 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
PRKDC-207ENST00000536483 LCHNA4D1U4 455 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 GCOM1H8Y6P7 765 aaPredicted RBP14.35□□□□□ -0.11
PRKDC-207ENST00000536483 NBNO60934 754 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 POLR2MP0CAP2 368 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 CKBP12277 381 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 PSEN2P49810 448 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 EVCP57679 992 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 DEFB103AP81534 67 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 FUT2Q10981 343 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 GRB10Q13322 594 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 LAMC2Q13753 1193 aa14.35□□□□□ -0.11
PRKDC-207ENST00000536483 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms