RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
UBE3B-206ENST00000536398 PCDHA6Q9UN73 950 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 SEC24BO95487 1268 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 ZNF286BP0CG31 522 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 CYP2C9P11712 490 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 ICAM3P32942 547 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 EVCP57679 992 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 FPGSQ05932 587 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 NTRK3Q16288 839 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 PKN1Q16512 942 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 MFSD5Q6N075 450 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 C16orf59Q7L2K0 433 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 SPATA33Q96N06 139 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-206ENST00000536398 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
UBE3B-206ENST00000536398 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 RIC8AQ9NPQ8 531 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 TMEM260Q9NX78 707 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
UBE3B-206ENST00000536398 NID2Q14112 1375 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 SMCO2A6NFE2 343 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 ACRP10323 421 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 TGFB3P10600 412 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 CSF2RAP15509 400 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 ITGB5P18084 799 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 CCL23P55773 120 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 DGKDQ16760 1214 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 PFKFB3Q16875 520 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-206ENST00000536398 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 NFRKBQ6P4R8 1299 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 SEZ6LQ9BYH1 1024 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
UBE3B-206ENST00000536398 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
UBE3B-206ENST00000536398 ATP9AO75110 1047 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 STAM2O75886 525 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-206ENST00000536398 ADCY7P51828 1080 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 CYFIP1Q7L576 1253 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 CTAGE1Q96RT6 745 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 WNT8AQ9H1J5 351 aa16.37■□□□□ 0.21
UBE3B-206ENST00000536398 SPDYE3A6NKU9 549 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 FIBPO43427 364 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 SCG2P13521 617 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 PSEN2P49810 448 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 STK3Q13188 491 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 MFSD10Q14728 455 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 GDF6Q6KF10 455 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-206ENST00000536398 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 SCLYQ96I15 445 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.213e-6■■■■■ 30.2
UBE3B-206ENST00000536398 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
UBE3B-206ENST00000536398 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 HAS3O00219 553 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 DTNBO60941 627 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 PPFIA4O75335 1185 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 CLK2P49760 499 aaKnown RBP16.35■□□□□ 0.21
UBE3B-206ENST00000536398 SP4Q02446 784 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 HIC1Q14526 733 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 JAKMIP3Q5VZ66 844 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 Q7L0L9 218 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 NLRX1Q86UT6 975 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 TMEM199Q8N511 208 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 VWCEQ96DN2 955 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 GPR20Q99678 358 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 C16orf70Q9BSU1 422 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 PKD2L1Q9P0L9 805 aa16.35■□□□□ 0.21
UBE3B-206ENST00000536398 F2P00734 622 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 IFNAR1P17181 557 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 ZNF200P98182 395 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-206ENST00000536398 PTPN11Q06124 597 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-206ENST00000536398 PPIGQ13427 754 aaKnown RBP eCLIP16.34■□□□□ 0.215e-6■■■■□ 20.2
UBE3B-206ENST00000536398 NEDD9Q14511 834 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 PTGISQ16647 500 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 ZNF274Q96GC6 653 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-206ENST00000536398 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
UBE3B-206ENST00000536398 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
UBE3B-206ENST00000536398 hCG_1984214I3L0E3 225 aa16.33■□□□□ 0.2
UBE3B-206ENST00000536398 LGALS2P05162 132 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms