RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CEP68Q76N32 757 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 Q8N1Y9 231 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 ARRDC4Q8NCT1 418 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 TRMT2BQ96GJ1 504 aaKnown RBP4.44□□□□□ -1.7
SKA3-207ENST00000536239 WRNIP1Q96S55 665 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 TMEM209Q96SK2 561 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 CRBNQ96SW2 442 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 SEC61A2Q9H9S3 476 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 ADAM29Q9UKF5 820 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 WASF3Q9UPY6 502 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 ZNF652Q9Y2D9 606 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 EMC9Q9Y3B6 208 aa4.44□□□□□ -1.7
SKA3-207ENST00000536239 TIMM13Q9Y5L4 95 aaPredicted RBP4.44□□□□□ -1.7
SKA3-207ENST00000536239 FOXS1O43638 330 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 CNOT4O95628 575 aaKnown RBP4.43□□□□□ -1.7
SKA3-207ENST00000536239 NRN1LQ496H8 165 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 IQCEQ6IPM2 695 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 ERICH6Q7L0X2 663 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 AMER2Q8N7J2 671 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 C19orf47Q8N9M1 422 aaKnown RBP4.43□□□□□ -1.7
SKA3-207ENST00000536239 TMEM87AQ8NBN3 555 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 GNRHR2Q96P88 292 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 CEP89Q96ST8 783 aa4.43□□□□□ -1.7
SKA3-207ENST00000536239 TCRBV5S2A0A599 114 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 ANKRD34BA5PLL1 514 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 HGSO14964 777 aaPredicted RBP4.42□□□□□ -1.7
SKA3-207ENST00000536239 ZNF202O95125 648 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 LRG1P02750 347 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 COL6A1P12109 1028 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 DPTQ07507 201 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 CHRNA2Q15822 529 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 LDLRAD1Q5T700 205 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 TCTN3Q6NUS6 607 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 POMZP3Q6PJE2 187 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 CCDC81Q6ZN84 652 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 NLRP10Q86W26 655 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 CRACR2BQ8N4Y2 399 aaPredicted RBP4.42□□□□□ -1.7
SKA3-207ENST00000536239 FRS2Q8WU20 508 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 ADOQ96SZ5 270 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 IKZF4Q9H2S9 585 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 CYP26B1Q9NR63 512 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 APEX2Q9UBZ4 518 aa4.42□□□□□ -1.7
SKA3-207ENST00000536239 NARSO43776 548 aaKnown RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 TADA3O75528 432 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 BCL6P41182 706 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 GTF2A2P52657 109 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 CYP4F3Q08477 520 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 COL9A2Q14055 689 aaPredicted RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 ZNF326Q5BKZ1 582 aaKnown RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 RALYLQ86SE5 291 aaKnown RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 BVESQ8NE79 360 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 NUDT10Q8NFP7 164 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 NPLOC4Q8TAT6 608 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 NUDT11Q96G61 164 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 TMEM169Q96HH4 297 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 TRIM8Q9BZR9 551 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 CSRNP2Q9H175 543 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 ZFR2Q9UPR6 939 aaKnown RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 COA3Q9Y2R0 106 aaPredicted RBP4.41□□□□□ -1.7
SKA3-207ENST00000536239 PCDHB4Q9Y5E5 795 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 PCSK5Q92824 1860 aa4.41□□□□□ -1.7
SKA3-207ENST00000536239 PLSCR1O15162 318 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 KLHL18O94889 574 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 MCM7P33993 719 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 ZNF76P36508 570 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 GIPRP48546 466 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 EIF6P56537 245 aaKnown RBP4.4□□□□□ -1.71
SKA3-207ENST00000536239 ZNF394Q53GI3 561 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 STEAP3Q658P3 488 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 E4F1Q66K89 784 aaPredicted RBP4.4□□□□□ -1.71
SKA3-207ENST00000536239 GTF2IRD2BQ6EKJ0 949 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 KIAA1211LQ6NV74 962 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 TMC5Q6UXY8 1006 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 Q6ZUG5 572 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 GTF2IRD2Q86UP8 949 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 GIMAP8Q8ND71 665 aaPredicted RBP4.4□□□□□ -1.71
SKA3-207ENST00000536239 EDAQ92838 391 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 EXTL1Q92935 676 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 LMF1Q96S06 567 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 APBA2Q99767 749 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 NKX2-4Q9H2Z4 354 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 HSPBP1Q9NZL4 362 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 TIMELESSQ9UNS1 1208 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 PCDHGB7Q9Y5F8 929 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 SLC4A7Q9Y6M7 1214 aa4.4□□□□□ -1.71
SKA3-207ENST00000536239 ARNTLO00327 626 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 NOP56O00567 594 aaKnown RBP4.39□□□□□ -1.71
SKA3-207ENST00000536239 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
SKA3-207ENST00000536239 PTH1RQ03431 593 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 LSM12Q3MHD2 195 aaKnown RBP4.39□□□□□ -1.71
SKA3-207ENST00000536239 EMC4Q5J8M3 183 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 AGBL4Q5VU57 503 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 CCDC103Q8IW40 242 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 TRIM59Q8IWR1 403 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 OR6P1Q8NGX9 317 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 DIO2Q92813 273 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 LRRC37BQ96QE4 947 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 BCL2L13Q9BXK5 485 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 BCL11AQ9H165 835 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms