RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 SSU72P8A0A1W2PR75 194 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 RIMBP2O15034 1052 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 GNA14O95837 355 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 LMAN1P49257 510 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 COASYQ13057 564 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 ASTE1Q2TB18 679 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 FAM26FQ5R3K3 315 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 CCNI2Q6ZMN8 369 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 CACNA2D4Q7Z3S7 1137 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 CEP63Q96MT8 703 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 ALS2CR12Q96Q35 445 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 ZC3H12CQ9C0D7 883 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
CHMP1A-202ENST00000535997 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 F8W031 263 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 TRAF5O00463 557 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 MAGEA1P43355 309 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 USP11P51784 963 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 PDXDC1Q6P996 788 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 MMGT1Q8N4V1 131 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 CERS5Q8N5B7 392 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 GLIS3Q8NEA6 775 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 TANGO6Q9C0B7 1094 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 MYH10P35580 1976 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 HLA-DOAP06340 250 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 TCP1P17987 556 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 SLC16A2P36021 539 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 KCNMA1Q12791 1236 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 CCDC65Q8IXS2 484 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 RNF10Q8N5U6 811 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 COG1Q8WTW3 980 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 CAPN6Q9Y6Q1 641 aa17.74■□□□□ 0.43
CHMP1A-202ENST00000535997 MARSP56192 900 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 ZSCAN26Q16670 478 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 GOLGA5Q8TBA6 731 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 RUBCNQ92622 972 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 MYH7BA7E2Y1 1941 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 DDR1Q08345 913 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 SMCR8Q8TEV9 937 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 EHD4Q9H223 541 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 CEP72Q9P209 647 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 KIAA1024Q9UPX6 916 aa17.73■□□□□ 0.43
CHMP1A-202ENST00000535997 CYP3A7-CYP3A51PA0A087WV96 503 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 MPHOSPH10O00566 681 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 MOCS3O95396 460 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 CYP3A7P24462 503 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 ACTN2P35609 894 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 LTBP1Q14766 1721 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 HPCAL4Q9UM19 191 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 PCDHA2Q9Y5H9 948 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 GJA10Q969M2 543 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 MKL1Q969V6 931 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 OSBPL9Q96SU4 736 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 KCNMB3Q9NPA1 279 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
CHMP1A-202ENST00000535997 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 PLA2G4BP0C869 781 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 APOBEC3HQ6NTF7 200 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 SPATA4Q8NEY3 305 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 TEKT1Q969V4 418 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 HYOU1Q9Y4L1 999 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.43
CHMP1A-202ENST00000535997 LRRC37AA6NMS7 1700 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 E9PMD0 336 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SYF2O95926 243 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SERPING1P05155 500 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 CAPN2P17655 700 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 TNNT3P45378 269 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 GFPT1Q06210 699 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SFMBT2Q5VUG0 894 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 MOXD1Q6UVY6 613 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 TRIM59Q8IWR1 403 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SLFN12Q8IYM2 578 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 MBOAT7Q96N66 472 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 NOX5Q96PH1 765 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms