RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ITGB5P18084 799 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 MCM7P33993 719 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 ATP2C1P98194 919 aaPredicted RBP18.38■□□□□ 0.53
VAMP1-205ENST00000535927 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
VAMP1-205ENST00000535927 PRKCZQ05513 592 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 MTMR1Q13613 665 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 PDIA5Q14554 519 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 STK38Q15208 465 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 SF3A1Q15459 793 aaKnown RBP18.38■□□□□ 0.53
VAMP1-205ENST00000535927 ZNF174Q15697 407 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 PRR16Q569H4 304 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 LINC00301Q8NCQ3 95 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 RAET1EQ8TD07 263 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 MTMR9Q96QG7 549 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 USP28Q96RU2 1077 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 ASTN1O14525 1302 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 ELP1O95163 1332 aa18.38■□□□□ 0.53
VAMP1-205ENST00000535927 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 PTGDRQ13258 359 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 NEDD9Q14511 834 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 PTPAQ15257 358 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 CALCRLQ16602 461 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 OTOP1Q7RTM1 612 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 C4orf32Q8N8J7 132 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 IL31RAQ8NI17 732 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
VAMP1-205ENST00000535927 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 KCNH7Q9NS40 1196 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 Q9Y3F1 56 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 NFASCO94856 1347 aa18.37■□□□□ 0.53
VAMP1-205ENST00000535927 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 SPTLC2O15270 562 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 SLC26A4O43511 780 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 ADCY3O60266 1144 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 MCM3APO60318 1980 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 TDP2O95551 362 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 SNAI1O95863 264 aaPredicted RBP18.36■□□□□ 0.53
VAMP1-205ENST00000535927 HMGCRP04035 888 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 OR52Z1P0C646 297 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 ACVR2BQ13705 512 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 TMEM266Q2M3C6 531 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 ZNF579Q8NAF0 562 aaKnown RBP18.36■□□□□ 0.53
VAMP1-205ENST00000535927 SLC5A5Q92911 643 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 LENG9Q96B70 501 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 AK8Q96MA6 479 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 TCEAL9Q9UHQ7 104 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 GABRQQ9UN88 632 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
VAMP1-205ENST00000535927 IPO5O00410 1097 aaKnown RBP18.35■□□□□ 0.53
VAMP1-205ENST00000535927 UBXN2AP68543 259 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 KCTD17Q8N5Z5 321 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 RDM1Q8NG50 284 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 ETNPPLQ8TBG4 499 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 SDF4Q9BRK5 362 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 TFIP11Q9UBB9 837 aaKnown RBP18.35■□□□□ 0.53
VAMP1-205ENST00000535927 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 SRPRBQ9Y5M8 271 aaKnown RBP18.35■□□□□ 0.53
VAMP1-205ENST00000535927 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
VAMP1-205ENST00000535927 MSH4O15457 936 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 RGS20O76081 388 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 CAPN2P17655 700 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 PTMSP20962 102 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 CTU1Q7Z7A3 348 aaKnown RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 KRI1Q8N9T8 703 aaKnown RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 LEO1Q8WVC0 666 aaPredicted RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 AGO4Q9HCK5 861 aaKnown RBP18.34■□□□□ 0.53
VAMP1-205ENST00000535927 FAM184BQ9ULE4 1060 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 MRVI1Q9Y6F6 885 aa18.34■□□□□ 0.53
VAMP1-205ENST00000535927 SLC37A4O43826 429 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 KRT76Q01546 638 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 TAPT1Q6NXT6 567 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 CCDC62Q6P9F0 684 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 SEPT14Q6ZU15 432 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 CYP2W1Q8TAV3 490 aa18.33■□□□□ 0.52
VAMP1-205ENST00000535927 EMID1Q96A84 441 aaPredicted RBP18.33■□□□□ 0.52
VAMP1-205ENST00000535927 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.52
VAMP1-205ENST00000535927 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 MSCO60682 206 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 GAS7O60861 476 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 CUTAO60888 179 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 PSMD10O75832 226 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 ARP10275 920 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 SFNP31947 248 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 GRK4P32298 578 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 PPP2R5CQ13362 524 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 LAMC2Q13753 1193 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 ADALQ6DHV7 355 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms