RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 C16orf59Q7L2K0 433 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 NOC4LQ9BVI4 516 aaKnown RBP18.86■□□□□ 0.61
ATL3-202ENST00000535789 UPF3BQ9BZI7 483 aaKnown RBP18.86■□□□□ 0.61
ATL3-202ENST00000535789 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 PSTPIP2Q9H939 334 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
ATL3-202ENST00000535789 LOXHD1Q8IVV2 1947 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 PPFIA3O75145 1194 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 GGPS1O95749 300 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 ZNF286BP0CG31 522 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 CYP2C18P33260 490 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 PKN1Q16512 942 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 CELF3Q5SZQ8 465 aaKnown RBP18.85■□□□□ 0.61
ATL3-202ENST00000535789 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 MFSD5Q6N075 450 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 PPTC7Q8NI37 304 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 PGBD1Q96JS3 809 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 RTEL1Q9NZ71 1219 aa18.85■□□□□ 0.61
ATL3-202ENST00000535789 NAP1L2Q9ULW6 460 aaPredicted RBP18.85■□□□□ 0.61
ATL3-202ENST00000535789 CHD7Q9P2D1 2997 aa18.84■□□□□ 0.61
ATL3-202ENST00000535789 TLR3O15455 904 aaKnown RBP18.84■□□□□ 0.61
ATL3-202ENST00000535789 ICAM3P32942 547 aa18.84■□□□□ 0.61
ATL3-202ENST00000535789 FPGSQ05932 587 aa18.84■□□□□ 0.61
ATL3-202ENST00000535789 CUL5Q93034 780 aa18.84■□□□□ 0.61
ATL3-202ENST00000535789 LARP6Q9BRS8 491 aaKnown RBP18.84■□□□□ 0.61
ATL3-202ENST00000535789 NCOA5Q9HCD5 579 aaKnown RBP18.84■□□□□ 0.61
ATL3-202ENST00000535789 BARHL2Q9NY43 387 aa18.84■□□□□ 0.61
ATL3-202ENST00000535789 SPATA31C2B4DYI2 1134 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 F2P00734 622 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 CYP2C9P11712 490 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 CSF2RAP15509 400 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 PSMA5P28066 241 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.6
ATL3-202ENST00000535789 CLK2P49760 499 aaKnown RBP18.83■□□□□ 0.6
ATL3-202ENST00000535789 NAPAP54920 295 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 FGD1P98174 961 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 HIC1Q14526 733 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 PPP1R18Q6NYC8 613 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 NFRKBQ6P4R8 1299 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.6
ATL3-202ENST00000535789 PHKBQ93100 1093 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATL3-202ENST00000535789 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 HIPK3Q9H422 1215 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 PCDHA6Q9UN73 950 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 PCDHA8Q9Y5H6 950 aa18.83■□□□□ 0.6
ATL3-202ENST00000535789 HAS3O00219 553 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 KPNA6O60684 536 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 SEC24BO95487 1268 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 ITGB5P18084 799 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 LAMC2Q13753 1193 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 PFKFB3Q16875 520 aaPredicted RBP18.82■□□□□ 0.6
ATL3-202ENST00000535789 BRDTQ58F21 947 aaPredicted RBP18.82■□□□□ 0.6
ATL3-202ENST00000535789 SEZ6LQ9BYH1 1024 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 RIC8AQ9NPQ8 531 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 TMEM260Q9NX78 707 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 MICAL3Q7RTP6 2002 aa18.82■□□□□ 0.6
ATL3-202ENST00000535789 MYH9P35579 1960 aaKnown RBP18.81■□□□□ 0.6
ATL3-202ENST00000535789 FIBPO43427 364 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 ATP9AO75110 1047 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 STAM2O75886 525 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 ACRP10323 421 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 TGFB3P10600 412 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
ATL3-202ENST00000535789 DGKDQ16760 1214 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 FAM47CQ5HY64 1035 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 GDF6Q6KF10 455 aaPredicted RBP18.81■□□□□ 0.6
ATL3-202ENST00000535789 KCNV1Q6PIU1 500 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 Q7L0L9 218 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 SESTD1Q86VW0 696 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 C16orf70Q9BSU1 422 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 UBIAD1Q9Y5Z9 338 aa18.81■□□□□ 0.6
ATL3-202ENST00000535789 hCG_1984214I3L0E3 225 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 SCG2P13521 617 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 KCNA2P16389 499 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 PSEN2P49810 448 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 ADCY7P51828 1080 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 CCL23P55773 120 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 GNPTABQ3T906 1256 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 TMEM240Q5SV17 173 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 FAM109BQ6ICB4 259 aaPredicted RBP18.8■□□□□ 0.6
ATL3-202ENST00000535789 ZNF713Q8N859 430 aaPredicted RBP18.8■□□□□ 0.6
ATL3-202ENST00000535789 DHX38Q92620 1227 aaKnown RBP18.8■□□□□ 0.6
ATL3-202ENST00000535789 SCLYQ96I15 445 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 ANO3Q9BYT9 981 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
ATL3-202ENST00000535789 SMCO2A6NFE2 343 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 PRPF3O43395 683 aaKnown RBP18.79■□□□□ 0.6
ATL3-202ENST00000535789 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
ATL3-202ENST00000535789 MFSD10Q14728 455 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 XRRA1Q6P2D8 792 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 METTL7BQ6UX53 244 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 TRIM50Q86XT4 487 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 CYP2W1Q8TAV3 490 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 WNT8BQ93098 351 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 GPRASP2Q96D09 838 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms