RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 LRRC41Q15345 812 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 CCDC144BQ3MJ40 725 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 TRIM60Q495X7 471 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 STAG2Q8N3U4 1231 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 TRIM43Q96BQ3 446 aaPredicted RBP10.68□□□□□ -0.7
UBB-204ENST00000535788 LRFN3Q9BTN0 628 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 KATNBL1Q9H079 304 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 IRF2BPLQ9H1B7 796 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 RSPH9Q9H1X1 276 aaPredicted RBP10.68□□□□□ -0.7
UBB-204ENST00000535788 ABHD16BQ9H3Z7 469 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 SPC25Q9HBM1 224 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 VAT1LQ9HCJ6 419 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 FAM184BQ9ULE4 1060 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 SCINQ9Y6U3 715 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
UBB-204ENST00000535788 MYH6P13533 1939 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 LTBP2Q14767 1821 aa10.68□□□□□ -0.7
UBB-204ENST00000535788 SYNRGQ9UMZ2 1314 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 ASB14A6NK59 587 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 KLRF2D3W0D1 207 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 PRC1O43663 620 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 S100BP04271 92 aaPredicted RBP10.67□□□□□ -0.7
UBB-204ENST00000535788 EPHB4P54760 987 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 SEMA3FQ13275 785 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 GRM4Q14833 912 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 NECTIN1Q15223 517 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 ZRSR2Q15696 482 aaKnown RBP10.67□□□□□ -0.7
UBB-204ENST00000535788 QRICH1Q2TAL8 776 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 PLEKHG6Q3KR16 790 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 RNF207Q6ZRF8 634 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 CATIPQ7Z7H3 387 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 C1orf131Q8NDD1 294 aaKnown RBP10.67□□□□□ -0.7
UBB-204ENST00000535788 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 INO80BQ9C086 356 aaPredicted RBP10.67□□□□□ -0.7
UBB-204ENST00000535788 PRDM12Q9H4Q4 367 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 EPHX3Q9H6B9 360 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 JMJD4Q9H9V9 463 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
UBB-204ENST00000535788 TCEAL9Q9UHQ7 104 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 MAD2L2Q9UI95 211 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 COL4A3BPQ9Y5P4 624 aa10.67□□□□□ -0.7
UBB-204ENST00000535788 ABCB11O95342 1321 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 XIRP2A4UGR9 3374 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 ADCY6O43306 1168 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 ADAMTS4O75173 837 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 MCM5P33992 734 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 TROAPQ12815 778 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 COL9A3Q14050 684 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 RNF20Q5VTR2 975 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 EEPD1Q7L9B9 569 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 RNF180Q86T96 592 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 FBXO11Q86XK2 927 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 FBXO16Q8IX29 292 aaPredicted RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 SNX27Q96L92 541 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 LY9Q9HBG7 655 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 PDLIM7Q9NR12 457 aa10.66□□□□□ -0.7
UBB-204ENST00000535788 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 G3BP2Q9UN86 482 aaKnown RBP10.66□□□□□ -0.7
UBB-204ENST00000535788 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
UBB-204ENST00000535788 DDAH1O94760 285 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 FAM200BP0CF97 657 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 ITGB8P26012 769 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 PSEN1P49768 467 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 MTA1Q13330 715 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 SLC35G1Q2M3R5 365 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
UBB-204ENST00000535788 NFXL1Q6ZNB6 911 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 HOMER1Q86YM7 354 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 NUP133Q8WUM0 1156 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 TMEM87BQ96K49 555 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 MYL10Q9BUA6 226 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 VTA1Q9NP79 307 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
UBB-204ENST00000535788 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
UBB-204ENST00000535788 CCDC69A6NI79 296 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 ZBTB5O15062 677 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 PPP1R11O60927 126 aaPredicted RBP10.64□□□□□ -0.71
UBB-204ENST00000535788 RECKO95980 971 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 C6orf222P0C671 652 aaPredicted RBP10.64□□□□□ -0.71
UBB-204ENST00000535788 PBX2P40425 430 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
UBB-204ENST00000535788 TNFAIP2Q03169 654 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 TFF2Q03403 129 aa10.64□□□□□ -0.71
UBB-204ENST00000535788 TMEM31Q5JXX7 168 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms