RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 CYP7A1P22680 504 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 RING1Q06587 406 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 DUSP6Q16828 381 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 RBM23Q86U06 439 aaKnown RBP9.06□□□□□ -0.96
CPSF7-214ENST00000535222 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
CPSF7-214ENST00000535222 SEPT8Q92599 483 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 NECTIN4Q96NY8 510 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 RIOK1Q9BRS2 568 aaKnown RBP9.06□□□□□ -0.96
CPSF7-214ENST00000535222 TLE6Q9H808 572 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 NCDNQ9UBB6 729 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 USTQ9Y2C2 406 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
CPSF7-214ENST00000535222 RSPH10B2B2RC85 870 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 RBAK-RBAKDNI3L0D1 243 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 ASGR2P07307 311 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 RSPH10BP0C881 870 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 RBM10P98175 930 aaKnown RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 TKFCQ3LXA3 575 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 SOWAHCQ53LP3 525 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 N4BP2L1Q5TBK1 243 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 RIN2Q8WYP3 895 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 NELL1Q92832 810 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 APBB2Q92870 758 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 SECISBP2LQ93073 1101 aaKnown RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 NEUROD6Q96NK8 337 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-214ENST00000535222 EPC1Q9H2F5 836 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 PARD6AQ9NPB6 346 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 CYP39A1Q9NYL5 469 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
CPSF7-214ENST00000535222 TTC3P53804 2025 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 AKAP13Q12802 2813 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 TMEM8BA6NDV4 472 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 SRRM3A6NNA2 597 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-214ENST00000535222 HAS3O00219 553 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 LILRB5O75023 590 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 ITIH3Q06033 890 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 UNQ6494/PRO21346Q6UXR6 183 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
CPSF7-214ENST00000535222 MIGA1Q8NAN2 632 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 KLHL23Q8NBE8 558 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 ZBTB44Q8NCP5 570 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CPSF7-214ENST00000535222 ADAM7Q9H2U9 754 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 POMKQ9H5K3 350 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 PIH1D3Q9NQM4 214 aaKnown RBP9.04□□□□□ -0.96
CPSF7-214ENST00000535222 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 LIMD1Q9UGP4 676 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 DUSP12Q9UNI6 340 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 KALRNO60229 2985 aa9.04□□□□□ -0.96
CPSF7-214ENST00000535222 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 MYO5AQ9Y4I1 1855 aaKnown RBP9.03□□□□□ -0.96
CPSF7-214ENST00000535222 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 F5H6K3 240 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 TM4SF5O14894 197 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 FSCN2O14926 492 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 PER2O15055 1255 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 CAND2O75155 1236 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 DGKIO75912 1065 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 C1QTNF9P0C862 333 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 UBE3AQ05086 875 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 KLRC3Q07444 240 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
CPSF7-214ENST00000535222 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 SERINC5Q86VE9 423 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 RPAP2Q8IXW5 612 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-214ENST00000535222 SIX5Q8N196 739 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-214ENST00000535222 OSBPL7Q9BZF2 842 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 SNRKQ9NRH2 765 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 MCM9Q9NXL9 1143 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 FEM1BQ9UK73 627 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 FBXO4Q9UKT5 387 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
CPSF7-214ENST00000535222 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.96
CPSF7-214ENST00000535222 LCTP09848 1927 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 KRBA1A5PL33 1030 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 TBC1D4O60343 1298 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 MMP3P08254 477 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 SRGAP2BP0DMP2 458 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 SP100P23497 879 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-214ENST00000535222 EDNRBP24530 442 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 HOXC8P31273 242 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 TECP42680 631 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 TDGQ13569 410 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 BTG3Q14201 252 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-214ENST00000535222 PPP2R5BQ15173 497 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 C7orf31Q8N865 590 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 SCFD2Q8WU76 684 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 COPS5Q92905 334 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 DYNLL2Q96FJ2 89 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-214ENST00000535222 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.97
CPSF7-214ENST00000535222 RNF146Q9NTX7 359 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms