RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 DYNC1LI2O43237 492 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 DUSP11O75319 330 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 CFBP00751 764 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 RXRAP19793 462 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 ACLYP53396 1101 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 GRM4Q14833 912 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 TRIM60Q495X7 471 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 TMEM63BQ5T3F8 832 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 PIGSQ96S52 555 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 MPHOSPH6Q99547 160 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 LBHD1Q9BQE6 289 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 AP5M1Q9H0R1 490 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 NAP1L2Q9ULW6 460 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 MRPL11Q9Y3B7 192 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 MCM3APO60318 1980 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 PQBP1O60828 265 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 ADAMTS4O75173 837 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 SMPD1P17405 629 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 MAGEA10P43363 369 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 NECTIN1Q15223 517 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 TLK2Q86UE8 772 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 ZNF654Q8IZM8 581 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 TCEANC2Q96MN5 208 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 TAAR1Q96RJ0 339 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 AMNQ9BXJ7 453 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 UBE2OQ9C0C9 1292 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 STARD7Q9NQZ5 370 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 PHF24Q9UPV7 400 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
CCDC90B-219ENST00000534753 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 B4DLN1 442 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 ZBTB5O15062 677 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 ASGR1P07306 291 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 CCNYL3P0C7X3 344 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 MMP16P51512 607 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 CHMP4BP1P59074 171 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 FGD1P98174 961 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 TLE2Q04725 743 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 ARHGEF16Q5VV41 709 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 IQSEC1Q6DN90 963 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 SEPT14Q6ZU15 432 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 PCSK9Q8NBP7 692 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 VTA1Q9NP79 307 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 PPP4R2Q9NY27 417 aa10.35□□□□□ -0.75
CCDC90B-219ENST00000534753 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 PPP1R11O60927 126 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 ADH1BP00325 375 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 KIF5BP33176 963 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 GJA9P57773 515 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 TROAPQ12815 778 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 SLC35G1Q2M3R5 365 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 SYNE3Q6ZMZ3 975 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 KLHDC9Q8NEP7 349 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 SYTL5Q8TDW5 730 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 RRP36Q96EU6 259 aaKnown RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 TMEM87BQ96K49 555 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 GLT1D1Q96MS3 346 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 RMDN3Q96TC7 470 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 COL20A1Q9P218 1284 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CCDC90B-219ENST00000534753 LCTP09848 1927 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 DCDC2CA8MYV0 355 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 CYTH3O43739 400 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 ZEB2O60315 1214 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 SORBS3O60504 671 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 DDAH1O94760 285 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 PLEKHA8P1O95397 391 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 MYL3P08590 195 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 TXNP10599 105 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 CPA1P15085 419 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms