RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	RPS12	P25398	132 aa	Known RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	DAB2	P98082	770 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	KIF23	Q02241	960 aa	Predicted RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	PDE4B	Q07343	736 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	GRAP	Q13588	217 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	NKG7	Q16617	165 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	NKPD1	Q17RQ9	610 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	TSNAXIP1	Q2TAA8	658 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	MEI1	Q5TIA1	1274 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	DLK2	Q6UY11	383 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	KRT26	Q7Z3Y9	468 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	TMC4	Q7Z404	712 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	CTU1	Q7Z7A3	348 aa	Known RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	USP48	Q86UV5	1035 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	MFSD4A	Q8N468	514 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	GRAPL	Q8TC17	118 aa	Predicted RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	UTP14A	Q9BVJ6	771 aa	Known RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	ADAMTS6	Q9UKP5	1117 aa		7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	RRP7A	Q9Y3A4	280 aa	Known RBP	7.94	□□□□□ -1.14
PICALM-223	ENST00000534412	ADM5	C9JUS6	153 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	CDK8	P49336	464 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	PRAMEF13	Q5VWM6	474 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	LETMD1	Q6P1Q0	360 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	KRTAP19-1	Q8IUB9	90 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	C2orf69	Q8N8R5	385 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	LRRN4CL	Q8ND94	238 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	XAGE3	Q8WTP9	111 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	FAM168A	Q92567	244 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	NOC4L	Q9BVI4	516 aa	Known RBP	7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	MRS2	Q9HD23	443 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	RTL9	Q8NET4	1388 aa		7.93	□□□□□ -1.14
PICALM-223	ENST00000534412	ANKRD36C	Q5JPF3	1778 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PSMD14	O00487	310 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	CST3	P01034	146 aa	Predicted RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PGR	P06401	933 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PPP2R1A	P30153	589 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	ST13	P50502	369 aa	Known RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PKN2	Q16513	984 aa	Known RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	CDKAL1	Q5VV42	579 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	DDX46	Q7L014	1031 aa	Known RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	NLRP10	Q86W26	655 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	NPAS4	Q8IUM7	802 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	JARID2	Q92833	1246 aa	Predicted RBP	7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	COX4I2	Q96KJ9	171 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PCGF6	Q9BYE7	350 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	PITPNM2	Q9BZ72	1349 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	CENPF	P49454	3210 aa		7.92	□□□□□ -1.14
PICALM-223	ENST00000534412	GFRA2	O00451	464 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	CBX7	O95931	251 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	FKBP1B	P68106	108 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	PROSER3	Q2NL68	480 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	HSP90AB3P	Q58FF7	597 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	C22orf34	Q6ZV56	151 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	RASAL3	Q86YV0	1011 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	POU5F2	Q8N7G0	328 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	DCPS	Q96C86	337 aa	Known RBP	7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	PLEKHF1	Q96S99	279 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	PRDM7	Q9NQW5	492 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	GGA3	Q9NZ52	723 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	LMCD1	Q9NZU5	365 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	SH3TC1	Q8TE82	1336 aa		7.91	□□□□□ -1.14
PICALM-223	ENST00000534412	LAMB2	P55268	1798 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	SORBS3	O60504	671 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	BPNT1	O95861	308 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	TFE3	P19532	575 aa	Predicted RBP	7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	RPL6	Q02878	288 aa	Known RBP	7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	CNGB1	Q14028	1251 aa	Predicted RBP	7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	NFE2L2	Q16236	605 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	SLC6A19	Q695T7	634 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	CDCA5	Q96FF9	252 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	HSPA12B	Q96MM6	686 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	THUMPD2	Q9BTF0	503 aa	Known RBP	7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	DBNDD1	Q9H9R9	158 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	POLL	Q9UGP5	575 aa		7.9	□□□□□ -1.14
PICALM-223	ENST00000534412	PAPPA2	Q9BXP8	1791 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	DDX60	Q8IY21	1712 aa	Known RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	COL4A1	P02462	1669 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	ASTN2	O75129	1339 aa	Predicted RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	PRR33	A8MZF0	331 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412		H3BS24	57 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	ECE2	O60344	883 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	VIL1	P09327	827 aa	Known RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	ERCC3	P19447	782 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	KIR3DL1	P43629	444 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	ZNF280A	P59817	542 aa	Predicted RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	TCIRG1	Q13488	830 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	SF3B3	Q15393	1217 aa	Known RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	MRPL41	Q8IXM3	137 aa	Known RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	RIN3	Q8TB24	985 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	TMEM40	Q8WWA1	233 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	CELF1	Q92879	486 aa	Known RBP	7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	GCC1	Q96CN9	775 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	TMEM87B	Q96K49	555 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	FAM161B	Q96MY7	647 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	KCNQ5	Q9NR82	932 aa		7.89	□□□□□ -1.15
PICALM-223	ENST00000534412	BABAM1	Q9NWV8	329 aa		7.89	□□□□□ -1.15

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