RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PSEN2P49810 448 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
CAPN1-228ENST00000534373 SP2Q02086 613 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 RBL2Q08999 1139 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 NEDD9Q14511 834 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
CAPN1-228ENST00000534373 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 AFAP1L1Q8TED9 768 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 SPATA31C2B4DYI2 1134 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 FIBPO43427 364 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 UBA1P22314 1058 aaKnown RBP15.43■□□□□ 0.06
CAPN1-228ENST00000534373 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
CAPN1-228ENST00000534373 MFSD10Q14728 455 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 GDF6Q6KF10 455 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-228ENST00000534373 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 SENP7Q9BQF6 1050 aa15.43■□□□□ 0.06
CAPN1-228ENST00000534373 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
CAPN1-228ENST00000534373 FOSL2P15408 326 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 PBX2P40425 430 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 PTK7Q13308 1070 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-228ENST00000534373 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 USP17L6PQ6QN14 398 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 TMTC3Q6ZXV5 915 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 DEFB128Q7Z7B8 93 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-228ENST00000534373 MAFAQ8NHW3 353 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-228ENST00000534373 PHOSPHO2Q8TCD6 241 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 C16orf70Q9BSU1 422 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 HDAC6Q9UBN7 1215 aa15.42■□□□□ 0.06
CAPN1-228ENST00000534373 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 A0A0C4DFX4 3053 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 BAIAP3O94812 1187 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 SELPP16109 830 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 RXRAP19793 462 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 RCAN1P53805 252 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 SKAP1Q86WV1 359 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
CAPN1-228ENST00000534373 PPP1R13LQ8WUF5 828 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 PCDHA11Q9Y5I1 949 aa15.41■□□□□ 0.06
CAPN1-228ENST00000534373 ZBBXA8MT70 800 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 H3BRB1 525 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 NOP56O00567 594 aaKnown RBP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 MAFGO15525 162 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 ZNF286BP0CG31 522 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 RASEFQ8IZ41 740 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 KCNB2Q92953 911 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 GPRASP2Q96D09 838 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 ZFP91Q96JP5 570 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
CAPN1-228ENST00000534373 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 TUT1Q9H6E5 874 aaKnown RBP15.4■□□□□ 0.06
CAPN1-228ENST00000534373 hCG_1984214I3L0E3 225 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 DLL1O00548 723 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 ZBTB43O43298 467 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 CKBP12277 381 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 ADCK5Q3MIX3 580 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 CCDC82Q8N4S0 544 aa15.39■□□□□ 0.05
CAPN1-228ENST00000534373 ZNF713Q8N859 430 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-228ENST00000534373 DHX38Q92620 1227 aaKnown RBP15.39■□□□□ 0.05
CAPN1-228ENST00000534373 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-228ENST00000534373 SPDYE3A6NKU9 549 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 CXCL10P02778 98 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 LGALS2P05162 132 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 GNAT1P11488 350 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 HOXC8P31273 242 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 RTN1Q16799 776 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 GPR20Q99678 358 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 GLT8D2Q9H1C3 349 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 EHMT1Q9H9B1 1298 aa15.38■□□□□ 0.05
CAPN1-228ENST00000534373 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms