RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 MXRA8Q9BRK3 442 aa22.6■■□□□ 1.21
CHEK1-215ENST00000533778 HTATIP2Q9BUP3 242 aa22.6■■□□□ 1.21
CHEK1-215ENST00000533778 PHF24Q9UPV7 400 aa22.6■■□□□ 1.21
CHEK1-215ENST00000533778 M0R2N6 131 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 COL6A1P12109 1028 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 ITGB5P18084 799 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 KRT2P35908 639 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 USP11P51784 963 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 ACLYP53396 1101 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 MLLT1Q03111 559 aaPredicted RBP22.59■■□□□ 1.21
CHEK1-215ENST00000533778 SAFBQ15424 915 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHEK1-215ENST00000533778 NPY5RQ15761 445 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 CCSAPQ6IQ19 270 aaPredicted RBP22.59■■□□□ 1.21
CHEK1-215ENST00000533778 NIPA1Q7RTP0 329 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 EMID1Q96A84 441 aaPredicted RBP22.59■■□□□ 1.21
CHEK1-215ENST00000533778 SENP7Q9BQF6 1050 aa22.59■■□□□ 1.21
CHEK1-215ENST00000533778 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
CHEK1-215ENST00000533778 CCDC194A0A1B0GVG4 234 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 ADAMTS3O15072 1205 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 KPNA6O60684 536 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 MMP1P03956 469 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 NONOQ15233 471 aaKnown RBP eCLIP22.58■■□□□ 1.21
CHEK1-215ENST00000533778 CELF3Q5SZQ8 465 aaKnown RBP22.58■■□□□ 1.21
CHEK1-215ENST00000533778 KRT40Q6A162 431 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 CRYGNQ8WXF5 182 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 COPS5Q92905 334 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 SNX21Q969T3 373 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 MLXIPQ9HAP2 919 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 GJB4Q9NTQ9 266 aa22.58■■□□□ 1.21
CHEK1-215ENST00000533778 LRRC37A2A6NM11 1700 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 MYADML2A6NDP7 307 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 A6NJR5 290 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 CTAGE5O15320 804 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 CABYRO75952 493 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 ASGR1P07306 291 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 UBA1P22314 1058 aaKnown RBP22.57■■□□□ 1.2
CHEK1-215ENST00000533778 BEX3Q00994 111 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 ARHGAP1Q07960 439 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 GLT1D1Q96MS3 346 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 POLR3EQ9NVU0 708 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 MCM3APO60318 1980 aa22.57■■□□□ 1.2
CHEK1-215ENST00000533778 K7ELQ4 463 aaPredicted RBP22.56■■□□□ 1.2
CHEK1-215ENST00000533778 MEIS1O00470 390 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 GGPS1O95749 300 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 CIITAP33076 1130 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 CUL4AQ13619 759 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 PPTC7Q8NI37 304 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 TBCKQ8TEA7 893 aa22.56■■□□□ 1.2
CHEK1-215ENST00000533778 PTGS1P23219 599 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 FOSBP53539 338 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 SETQ01105 290 aaPredicted RBP22.55■■□□□ 1.2
CHEK1-215ENST00000533778 SP2Q02086 613 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 SEMA3FQ13275 785 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 MYSM1Q5VVJ2 828 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 METTL7BQ6UX53 244 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 HSCBQ8IWL3 235 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 DIS3L2Q8IYB7 885 aaKnown RBP22.55■■□□□ 1.2
CHEK1-215ENST00000533778 FBXO18Q8NFZ0 1043 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 AFG1LQ8WV93 481 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 SPATA33Q96N06 139 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 NAP1L4Q99733 375 aaKnown RBP22.55■■□□□ 1.2
CHEK1-215ENST00000533778 KCNH7Q9NS40 1196 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 ELP1O95163 1332 aa22.55■■□□□ 1.2
CHEK1-215ENST00000533778 A0A1W2PQ45 241 aaPredicted RBP22.54■■□□□ 1.2
CHEK1-215ENST00000533778 A0A1W2PQY0 241 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 IRX5P78411 483 aaPredicted RBP22.54■■□□□ 1.2
CHEK1-215ENST00000533778 DGKDQ16760 1214 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 PLA2G4DQ86XP0 818 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 CYP2W1Q8TAV3 490 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 OXER1Q8TDS5 423 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 FERMT2Q96AC1 680 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 VTI1AQ96AJ9 217 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 STARD7Q9NQZ5 370 aa22.54■■□□□ 1.2
CHEK1-215ENST00000533778 FAM86B1E9PN63 330 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 NOP56O00567 594 aaKnown RBP22.53■■□□□ 1.2
CHEK1-215ENST00000533778 FAM86B2P0C5J1 330 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 GJB2P29033 226 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 MOXD1Q6UVY6 613 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 PIK3AP1Q6ZUJ8 805 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 SDF4Q9BRK5 362 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 SEZ6LQ9BYH1 1024 aa22.53■■□□□ 1.2
CHEK1-215ENST00000533778 BRCA2P51587 3418 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 BTBD18B2RXH4 712 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 PPFIA4O75335 1185 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 MMP3P08254 477 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 MYL3P08590 195 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 KCNA2P16389 499 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 GUCY1B3Q02153 619 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 GNL2Q13823 731 aaKnown RBP22.52■■□□□ 1.2
CHEK1-215ENST00000533778 INF2Q27J81 1249 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 PRR16Q569H4 304 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 C1orf53Q5VUE5 145 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 SLC39A5Q6ZMH5 540 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 CYFIP1Q7L576 1253 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 NEK8Q86SG6 692 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 DPF3Q92784 378 aa22.52■■□□□ 1.2
CHEK1-215ENST00000533778 INTS4Q96HW7 963 aaKnown RBP22.52■■□□□ 1.2
CHEK1-215ENST00000533778 MTG1Q9BT17 334 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms