RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NFE2L3Q9Y4A8 694 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 TYW5A2RUC4 315 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 ZNF233A6NK53 670 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 TNFAIP2Q03169 654 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 BCL9O00512 1426 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 KBTBD13C9JR72 458 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 SRGNP10124 158 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 CYP2D6P10635 497 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 INPP5BP32019 993 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 HMGCS2P54868 508 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 PSMD2Q13200 908 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 ANKFY1Q9P2R3 1169 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 EPHX2P34913 555 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 PHKA2P46019 1235 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 VAV2P52735 878 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 NECTIN1Q15223 517 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 C7orf31Q8N865 590 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 UIMC1Q96RL1 719 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 C2orf40Q9H1Z8 148 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 MTMR6Q9Y217 621 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CCDC160A6NGH7 325 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CAPN9O14815 690 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 TUBB2AQ13885 445 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CCL15Q16663 113 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 PPP1R14CQ8TAE6 165 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 TUBB2BQ9BVA1 445 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 FLT1P17948 1338 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 GCNAQ96QF7 691 aa12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 BAG1Q99933 345 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-211ENST00000533727 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 PFASO15067 1338 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 A6NNZ2 444 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 SNAP23O00161 211 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CLGNO14967 610 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 KARSQ15046 597 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 TUBB8Q3ZCM7 444 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 FAM173BQ6P4H8 233 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ELF1P32519 619 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 FCGRTP55899 365 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 FANCCQ00597 558 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 DHTKD1Q96HY7 919 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 MAP2K2P36507 400 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ADAM9Q13443 819 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ELF2Q15723 593 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 ZNF569Q5MCW4 686 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 LZTFL1Q9NQ48 299 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
AMBRA1-211ENST00000533727 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 E7EVH7 732 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GCLCP48506 637 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms