RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 CDC23Q9UJX2 597 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 TBX3O15119 743 aa21.44■■□□□ 1.02
UBXN1-215ENST00000533476 FOSP01100 380 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-215ENST00000533476 KLK7P49862 253 aa21.44■■□□□ 1.02
UBXN1-215ENST00000533476 CLCN6P51797 869 aa21.44■■□□□ 1.02
UBXN1-215ENST00000533476 MAN2A1Q16706 1144 aa21.44■■□□□ 1.02
UBXN1-215ENST00000533476 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
UBXN1-215ENST00000533476 ZNHIT6Q9NWK9 470 aaKnown RBP21.44■■□□□ 1.02
UBXN1-215ENST00000533476 HERC5Q9UII4 1024 aaKnown RBP21.44■■□□□ 1.02
UBXN1-215ENST00000533476 Q4G0T1 1027 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 ZNF662Q6ZS27 426 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 MYOCDQ8IZQ8 938 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 GPR161Q8N6U8 529 aaKnown RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 ETNPPLQ8TBG4 499 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 GOLGA1Q92805 767 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 NAPGQ99747 312 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 PANK4Q9NVE7 773 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 KIAA1024Q9UPX6 916 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 ABL1P00519 1130 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 SREBF1P36956 1147 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 CDK17Q00537 523 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 IKQ13123 557 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 RRP1BQ14684 758 aaKnown RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 FAM26FQ5R3K3 315 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 RABGGTAQ92696 567 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 PCMTD1Q96MG8 357 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-215ENST00000533476 NDST4Q9H3R1 872 aa21.43■■□□□ 1.02
UBXN1-215ENST00000533476 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
UBXN1-215ENST00000533476 POTEB3A0JP26 581 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 POTECB2RU33 542 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 NKRFO15226 690 aaKnown RBP eCLIP21.42■■□□□ 1.02
UBXN1-215ENST00000533476 PLA2G4BP0C869 781 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 SNAP25P60880 206 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 KRT83P78385 493 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 KIF4BQ2VIQ3 1234 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 GRIPAP1Q4V328 841 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 ZCWPW2Q504Y3 356 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 HAUS3Q68CZ6 603 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 POTEBQ6S5H4 581 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 CCDC170Q8IYT3 715 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 HAUS4Q9H6D7 363 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 TMOD2Q9NZR1 351 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 SIK3Q9Y2K2 1263 aa21.42■■□□□ 1.02
UBXN1-215ENST00000533476 E9PMD0 336 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 ZRANB2O95218 330 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-215ENST00000533476 CYLC1P35663 651 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-215ENST00000533476 HERVK_113P62684 666 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SPIRE1Q08AE8 756 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 TEX35Q5T0J7 233 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SRGAP1Q7Z6B7 1085 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 CCDC65Q8IXS2 484 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 CEP112Q8N8E3 955 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 GLIS3Q8NEA6 775 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 A0A1W2PRG0 241 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SPDYE2BA6NHP3 402 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SPDYE3A6NKU9 549 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SSBP05455 408 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-215ENST00000533476 SPDYE6P0CI01 402 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 LRRC41Q15345 812 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 USH1GQ495M9 461 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 TEX2Q8IWB9 1127 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 LENG9Q96B70 501 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-215ENST00000533476 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
UBXN1-215ENST00000533476 C21orf2O43822 256 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 MED24O75448 989 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 HNRNPH3P31942 346 aaKnown RBP21.4■■□□□ 1.02
UBXN1-215ENST00000533476 CIITAP33076 1130 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 STAT3P40763 770 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 PRR16Q569H4 304 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 RSBN1LQ6PCB5 846 aaPredicted RBP21.4■■□□□ 1.02
UBXN1-215ENST00000533476 TMCO3Q6UWJ1 677 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 CCDC84Q86UT8 332 aaPredicted RBP21.4■■□□□ 1.02
UBXN1-215ENST00000533476 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 ERMNQ8TAM6 284 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 PCDHA2Q9Y5H9 948 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 FHOD1Q9Y613 1164 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 STK24Q9Y6E0 443 aa21.4■■□□□ 1.02
UBXN1-215ENST00000533476 EIF3CLB5ME19 914 aaKnown RBP21.39■■□□□ 1.02
UBXN1-215ENST00000533476 OPLAHO14841 1288 aa21.39■■□□□ 1.02
UBXN1-215ENST00000533476 CYP11B2P19099 503 aa21.39■■□□□ 1.02
UBXN1-215ENST00000533476 CHMP4BP1P59074 171 aa21.39■■□□□ 1.02
UBXN1-215ENST00000533476 EIF3CQ99613 913 aaKnown RBP21.39■■□□□ 1.02
UBXN1-215ENST00000533476 NHEJ1Q9H9Q4 299 aaPredicted RBP21.39■■□□□ 1.02
UBXN1-215ENST00000533476 ARHGEF10LQ9HCE6 1279 aa21.39■■□□□ 1.02
UBXN1-215ENST00000533476 PITPNM2Q9BZ72 1349 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 FRMD3A2A2Y4 597 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 PIK3CDO00329 1044 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 SLC12A3P55017 1021 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 FKBP3Q00688 224 aaKnown RBP21.39■■□□□ 1.01
UBXN1-215ENST00000533476 R3HDM1Q15032 1099 aaKnown RBP21.39■■□□□ 1.01
UBXN1-215ENST00000533476 FAM20AQ96MK3 541 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 PRR12Q9ULL5 1215 aa21.39■■□□□ 1.01
UBXN1-215ENST00000533476 TUBB4BP68371 445 aa21.38■■□□□ 1.01
UBXN1-215ENST00000533476 TRAF1Q13077 416 aa21.38■■□□□ 1.01
UBXN1-215ENST00000533476 TERF2Q15554 542 aa21.38■■□□□ 1.01
UBXN1-215ENST00000533476 WHAMMP3Q1A5X7 153 aa21.38■■□□□ 1.01
UBXN1-215ENST00000533476 CEP63Q96MT8 703 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms