RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KPNA6O60684 536 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 CDKL5O76039 1030 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 LAMC2Q13753 1193 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 CELF3Q5SZQ8 465 aaKnown RBP23.42■■□□□ 1.34
CCS-208ENST00000533244 MYSM1Q5VVJ2 828 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 GTF3C6Q969F1 213 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 GPRASP2Q96D09 838 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 SEZ6LQ9BYH1 1024 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 PRO3102Q9H379 93 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 PDLIM7Q9NR12 457 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 TMEM260Q9NX78 707 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 VPS54Q9P1Q0 977 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 HOXD8P13378 290 aaPredicted RBP23.41■■□□□ 1.34
CCS-208ENST00000533244 SYN1P17600 705 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 ITGB5P18084 799 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 GNA11P29992 359 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 SREBF1P36956 1147 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 MCTP2Q6DN12 878 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 DHX37Q8IY37 1157 aaKnown RBP23.41■■□□□ 1.34
CCS-208ENST00000533244 FAM177A1Q8N128 213 aaPredicted RBP23.41■■□□□ 1.34
CCS-208ENST00000533244 PPTC7Q8NI37 304 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
CCS-208ENST00000533244 LTBP2Q14767 1821 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 MYH7BA7E2Y1 1941 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 MROH7Q68CQ1 1323 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 GGPS1O95749 300 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 MYL3P08590 195 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 ITGA7Q13683 1181 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 NLRX1Q86UT6 975 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 CRYGNQ8WXF5 182 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 VTI1AQ96AJ9 217 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 SENP7Q9BQF6 1050 aa23.4■■□□□ 1.34
CCS-208ENST00000533244 MTG1Q9BT17 334 aaPredicted RBP23.4■■□□□ 1.34
CCS-208ENST00000533244 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.33
CCS-208ENST00000533244 FAM126BQ8IXS8 530 aa23.39■■□□□ 1.33
CCS-208ENST00000533244 REXO1Q8N1G1 1221 aaKnown RBP23.39■■□□□ 1.33
CCS-208ENST00000533244 NECAB1Q8N987 351 aa23.39■■□□□ 1.33
CCS-208ENST00000533244 GDF15Q99988 308 aa23.39■■□□□ 1.33
CCS-208ENST00000533244 RANBP2P49792 3224 aaKnown RBP23.39■■□□□ 1.33
CCS-208ENST00000533244 CLTBP09497 229 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 PSMC6P62333 389 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 FAAP100Q0VG06 881 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 NEDD9Q14511 834 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 HSDL1Q3SXM5 330 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 JAKMIP3Q5VZ66 844 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 BICD2Q8TD16 824 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 CDHR1Q96JP9 859 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 AIFM3Q96NN9 605 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 BCAS3Q9H6U6 928 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 JADE2Q9NQC1 790 aa23.38■■□□□ 1.33
CCS-208ENST00000533244 TRIM43BA6NCK2 446 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 ST3GAL1Q11201 340 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 NPY5RQ15761 445 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 DGKDQ16760 1214 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 METTL7BQ6UX53 244 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 SH3RF1Q7Z6J0 888 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 TRIM43Q96BQ3 446 aaPredicted RBP23.37■■□□□ 1.33
CCS-208ENST00000533244 UPF2Q9HAU5 1272 aaKnown RBP23.37■■□□□ 1.33
CCS-208ENST00000533244 LIMCH1Q9UPQ0 1083 aa23.37■■□□□ 1.33
CCS-208ENST00000533244 DCDC2CA8MYV0 355 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 KIAA0355O15063 1070 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 MAFGO15525 162 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 CD4P01730 458 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 KCNA2P16389 499 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 ARHGAP4P98171 946 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 CHRDL2Q6WN34 429 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 DAGLBQ8NCG7 672 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 KAT2BQ92831 832 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 SPATA33Q96N06 139 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 MXRA8Q9BRK3 442 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 PCDH10Q9P2E7 1040 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 TBX21Q9UL17 535 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 COLQQ9Y215 455 aaPredicted RBP23.36■■□□□ 1.33
CCS-208ENST00000533244 DOCK5Q9H7D0 1870 aa23.36■■□□□ 1.33
CCS-208ENST00000533244 CYP3A4P08684 503 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 FDPSP14324 419 aaKnown RBP23.35■■□□□ 1.33
CCS-208ENST00000533244 MAGEA10P43363 369 aaPredicted RBP23.35■■□□□ 1.33
CCS-208ENST00000533244 NLRP5P59047 1200 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 MTMR1Q13613 665 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 NSUN7Q8NE18 718 aaKnown RBP23.35■■□□□ 1.33
CCS-208ENST00000533244 RASGRP4Q8TDF6 673 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 MLXIPQ9HAP2 919 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 PRKAG2Q9UGJ0 569 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 PCDHA4Q9UN74 947 aa23.35■■□□□ 1.33
CCS-208ENST00000533244 M0R2N6 131 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 SORBS3O60504 671 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 ATP9AO75110 1047 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 F2P00734 622 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 BMP8BP34820 402 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 RABEP1Q15276 862 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 CEP55Q53EZ4 464 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 GALNT17Q6IS24 598 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 NFRKBQ6P4R8 1299 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 CYFIP1Q7L576 1253 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 GIMAP8Q8ND71 665 aaPredicted RBP23.34■■□□□ 1.33
CCS-208ENST00000533244 CYP2W1Q8TAV3 490 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 TBC1D32Q96NH3 1257 aa23.34■■□□□ 1.33
CCS-208ENST00000533244 PRDM5Q9NQX1 630 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms