RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 LPXNO60711 386 aa9.49□□□□□ -0.89
NEDD8-207ENST00000533242 BTNL9Q6UXG8 535 aa9.49□□□□□ -0.89
NEDD8-207ENST00000533242 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
NEDD8-207ENST00000533242 MPHOSPH6Q99547 160 aaKnown RBP9.49□□□□□ -0.89
NEDD8-207ENST00000533242 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
NEDD8-207ENST00000533242 NAPBQ9H115 298 aa9.49□□□□□ -0.89
NEDD8-207ENST00000533242 JAK2O60674 1132 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 KCNJ6P48051 423 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 NOVP48745 357 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 CHMP4CQ96CF2 233 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-207ENST00000533242 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 KIAA1217Q5T5P2 1943 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 A6NJR5 290 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 TSPY2A6NKD2 308 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 PI4K2BG5E9Z4 385 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-207ENST00000533242 PPP2R5BQ15173 497 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 CCDC96Q2M329 555 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 IL17RBQ9NRM6 502 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 STX8Q9UNK0 236 aa9.48□□□□□ -0.89
NEDD8-207ENST00000533242 LAMA4Q16363 1823 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 NFIBO00712 420 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 UBE2HP62256 183 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 PDE4DQ08499 809 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 SYDE2Q5VT97 1194 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 CAGE1Q8TC20 777 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 AFAP1L1Q8TED9 768 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 NOD1Q9Y239 953 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 B4DLN1 442 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
NEDD8-207ENST00000533242 EDNRBP24530 442 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 PSMA5P28066 241 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 MRPL12P52815 198 aaKnown RBP9.47□□□□□ -0.89
NEDD8-207ENST00000533242 WDR5P61964 334 aaKnown RBP9.47□□□□□ -0.89
NEDD8-207ENST00000533242 ZMYM1Q5SVZ6 1142 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 LARP1BQ659C4 914 aaKnown RBP9.47□□□□□ -0.89
NEDD8-207ENST00000533242 TTBK2Q6IQ55 1244 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 SLC30A10Q6XR72 485 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 RASGRP2Q7LDG7 609 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 CLEC4DQ8WXI8 215 aa9.47□□□□□ -0.89
NEDD8-207ENST00000533242 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
NEDD8-207ENST00000533242 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.894e-7■■□□□ 13.3
NEDD8-207ENST00000533242 PPFIA3O75145 1194 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 CALML3P27482 149 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 ERVK-21P61565 698 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 RBL2Q08999 1139 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 PTGISQ16647 500 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 MCMDC2Q4G0Z9 681 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 CNKSR3Q6P9H4 555 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 RNF207Q6ZRF8 634 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 SESTD1Q86VW0 696 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 DNERQ8NFT8 737 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 GDPD5Q8WTR4 605 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 NAP1L5Q96NT1 182 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-207ENST00000533242 CDH23Q9H251 3354 aa9.46□□□□□ -0.9
NEDD8-207ENST00000533242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 LCHNA4D1U4 455 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 FAM86C2PA6NEL3 165 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 ORC4O43929 436 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 NMT2O60551 498 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 CXCL10P02778 98 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 SELPP16109 830 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 SLC16A2P36021 539 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 Q6ZUG5 572 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 PPP1R13LQ8WUF5 828 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 COPS5Q92905 334 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 NEK1Q96PY6 1258 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 FUCA2Q9BTY2 467 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 UBE2ZQ9H832 354 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 ANAPC4Q9UJX5 808 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 MTMR7Q9Y216 660 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 FOXP2O15409 715 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 EFCAB14O75071 495 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 TOP1P11387 765 aaKnown RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 LRRC8DQ7L1W4 858 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 MAF1Q9H063 256 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 CD320Q9NPF0 282 aa9.45□□□□□ -0.9
NEDD8-207ENST00000533242 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
NEDD8-207ENST00000533242 VCANP13611 3396 aa9.44□□□□□ -0.9
NEDD8-207ENST00000533242 MYH7BA7E2Y1 1941 aa9.44□□□□□ -0.9
NEDD8-207ENST00000533242 MICAL3Q7RTP6 2002 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms