RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 ANO2Q9NQ90 1003 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 TECTAO75443 2155 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 PRDM1O75626 825 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 NUBP1P53384 320 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 SNAP25P60880 206 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 ZXDAP98168 799 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 PTK7Q13308 1070 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 CLUL1Q15846 466 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 COPS5Q92905 334 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 LMAN2LQ9H0V9 348 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
TRAPPC4-213ENST00000533149 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 CALML3P27482 149 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 ZNF618Q5T7W0 954 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 AFG1LQ8WV93 481 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 APPBP2Q92624 585 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 LCTP09848 1927 aa13.19□□□□□ -0.3
TRAPPC4-213ENST00000533149 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 M0R2C6 588 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 NFIBO00712 420 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 RB1P06400 928 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 MMP3P08254 477 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 EDNRBP24530 442 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 TDO2P48775 406 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 RBM25P49756 843 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 PTH1RQ03431 593 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 DLX2Q07687 328 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 HYAL1Q12794 435 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 KAT2BQ92831 832 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 CACNA1AO00555 2505 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
TRAPPC4-213ENST00000533149 C5orf67F2Z3F1 127 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 GH1P01241 217 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 GNAT2P19087 354 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 AVPR2P30518 371 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 TFAP4Q01664 338 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 MBTPS1Q14703 1052 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 DGKDQ16760 1214 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 RWDD3Q9Y3V2 267 aa13.17□□□□□ -0.3
TRAPPC4-213ENST00000533149 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 LOC730098B7Z3J9 87 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 TBX10O75333 385 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 ARIH2O95376 493 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 EYA4O95677 639 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 SEPT8Q92599 483 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 USP34Q70CQ2 3546 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 KMT2EQ8IZD2 1858 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
TRAPPC4-213ENST00000533149 H0Y858 1186 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 UPP2O95045 317 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 APPP05067 770 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 CTNNB1P35222 781 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 ID4P47928 161 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 PSEN2P49810 448 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 VCPP55072 806 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 ARHGAP1Q07960 439 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 ADAM15Q13444 863 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 MFSD10Q14728 455 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 CBX2Q14781 532 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 FIBCD1Q8N539 461 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms