RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 RGS22Q8NE09 1264 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 RAD9AQ99638 391 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.521e-12■■■■□ 25.8
CHMP4A-206ENST00000533011 RIOX1Q9H6W3 641 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 GNEQ9Y223 722 aaKnown RBP11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
CHMP4A-206ENST00000533011 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 LOC102724159A0A0B4J2E5 919 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 ZBTB5O15062 677 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 ADCY6O43306 1168 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 CALM1P0DP23 149 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 CALM2P0DP24 149 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 CALM3P0DP25 149 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 CALML3P27482 149 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 HSPA4P34932 840 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 NUBP1P53384 320 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 RPS6P62753 249 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 BEX3Q00994 111 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 TRAF1Q13077 416 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 BFSP2Q13515 415 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 PWP2Q15269 919 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 TLK2Q86UE8 772 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 MCF2L2Q86YR7 1114 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 EDAQ92838 391 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 KCNB2Q92953 911 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 PURBQ96QR8 312 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 MRPL11Q9Y3B7 192 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 MYH6P13533 1939 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 ASTN1O14525 1302 aa11.79□□□□□ -0.52
CHMP4A-206ENST00000533011 EFCAB14O75071 495 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 IQCF3P0C7M6 154 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 GNAQP50148 359 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 SLC30A10Q6XR72 485 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 SYNE3Q6ZMZ3 975 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 SGMS1Q86VZ5 419 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 GDPD5Q8WTR4 605 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 PABPC5Q96DU9 382 aaKnown RBP11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 PIGSQ96S52 555 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 MPHOSPH6Q99547 160 aaKnown RBP11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 LZTS2Q9BRK4 669 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 KATNBL1Q9H079 304 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 LCTP09848 1927 aa11.78□□□□□ -0.52
CHMP4A-206ENST00000533011 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 B4DLN1 442 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 CYTH3O43739 400 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 ALDH5A1P51649 535 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 MRPL12P52815 198 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 TBC1D5Q92609 795 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 PBXIP1Q96AQ6 731 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 MRPL38Q96DV4 380 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 PCDHA1Q9Y5I3 950 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 MCM3APO60318 1980 aa11.77□□□□□ -0.53
CHMP4A-206ENST00000533011 PROB1E7EW31 1015 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 PPP1R11O60927 126 aaPredicted RBP11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 RXRAP19793 462 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 PSMA5P28066 241 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 IRS1P35568 1242 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 FGD1P98174 961 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 TCF15Q12870 199 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 RRP36Q96EU6 259 aaKnown RBP11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 JAKMIP1Q96N16 626 aaKnown RBP11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 VTA1Q9NP79 307 aa11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
CHMP4A-206ENST00000533011 KPNA6O60684 536 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms