RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 HOXD8P13378 290 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 UBA1P22314 1058 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 SREBF1P36956 1147 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 AP3B2Q13367 1082 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 RABEP1Q15276 862 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 RASGRP4Q8TDF6 673 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 AFG1LQ8WV93 481 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 STARD7Q9NQZ5 370 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 TELO2Q9Y4R8 837 aa15.96■□□□□ 0.15
TSPAN4-220ENST00000532375 FIBPO43427 364 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 JAK2O60674 1132 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 ATP9AO75110 1047 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 CDKL5O76039 1030 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 CYP3A4P08684 503 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 GNA11P29992 359 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 CPT1AP50416 773 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 TLE2Q04725 743 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 LAMC2Q13753 1193 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 TRIM60Q495X7 471 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 PRPF38BQ5VTL8 546 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 ANKRD33Q7Z3H0 272 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 C7orf61Q8IZ16 206 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 FAM177A1Q8N128 213 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 GPRASP2Q96D09 838 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 GLT1D1Q96MS3 346 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 SENP7Q9BQF6 1050 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
TSPAN4-220ENST00000532375 ARVCFO00192 962 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 MEIS1O00470 390 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 CABYRO75952 493 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 GGPS1O95749 300 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 MMP3P08254 477 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 KCNA2P16389 499 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 HSDL1Q3SXM5 330 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 GNPTABQ3T906 1256 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 REXO1Q8N1G1 1221 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 KAT2BQ92831 832 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 TOX2Q96NM4 488 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 MXRA8Q9BRK3 442 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 ORC3Q9UBD5 711 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 PCDHA4Q9UN74 947 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 KCNJ14Q9UNX9 436 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 NR2E3Q9Y5X4 410 aa15.94■□□□□ 0.14
TSPAN4-220ENST00000532375 IGLV3-22A0A075B6J6 115 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 FAM86B1E9PN63 330 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 ZEB2O60315 1214 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 FAM86B2P0C5J1 330 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 ARP10275 920 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 NLRP5P59047 1200 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 PSMC6P62333 389 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 ARHGAP4P98171 946 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 SH3RF1Q7Z6J0 888 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 DHX37Q8IY37 1157 aaKnown RBP15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 PPTC7Q8NI37 304 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 ZSCAN31Q96LW9 406 aaPredicted RBP15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 PRO3102Q9H379 93 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 POLR3EQ9NVU0 708 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 ATP11BQ9Y2G3 1177 aa15.93■□□□□ 0.14
TSPAN4-220ENST00000532375 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 MAFGO15525 162 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 SORBS3O60504 671 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 KPNA6O60684 536 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 CD4P01730 458 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 MYL3P08590 195 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 CIITAP33076 1130 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 FAAP100Q0VG06 881 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 CEP55Q53EZ4 464 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 NLRX1Q86UT6 975 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 FAM126BQ8IXS8 530 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 MTG1Q9BT17 334 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 EHMT1Q9H9B1 1298 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 PDLIM7Q9NR12 457 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 KCNH7Q9NS40 1196 aa15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 ZMYND8Q9ULU4 1186 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-220ENST00000532375 TRIM43BA6NCK2 446 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 HAS3O00219 553 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 PPFIA4O75335 1185 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 SYN1P17600 705 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 ITGB8P26012 769 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 NEDD9Q14511 834 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 GALNT17Q6IS24 598 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 METTL7BQ6UX53 244 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 CYFIP1Q7L576 1253 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 NIPA1Q7RTP0 329 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 BLIDQ8IZY5 108 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 LENG9Q96B70 501 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms