RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 SCG2P13521 617 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 UBA1P22314 1058 aaKnown RBP26.36■■□□□ 1.81
CAPN1-222ENST00000532285 ADCY7P51828 1080 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 NFRKBQ6P4R8 1299 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 ZNF274Q96GC6 653 aaPredicted RBP26.36■■□□□ 1.81
CAPN1-222ENST00000532285 TRPV6Q9H1D0 765 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 PCDHA6Q9UN73 950 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 PCDHA8Q9Y5H6 950 aa26.36■■□□□ 1.81
CAPN1-222ENST00000532285 LAMA3Q16787 3333 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 SMCO2A6NFE2 343 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 SPATA31C2B4DYI2 1134 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 FIBPO43427 364 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 B4GALT4O60513 344 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 SLC34A2O95436 690 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 CCT2P78371 535 aaKnown RBP26.35■■□□□ 1.81
CAPN1-222ENST00000532285 AKAP17AQ02040 695 aaKnown RBP26.35■■□□□ 1.81
CAPN1-222ENST00000532285 LRIT3Q3SXY7 679 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 NLRX1Q86UT6 975 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 SPATA33Q96N06 139 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 MLXIPQ9HAP2 919 aa26.35■■□□□ 1.81
CAPN1-222ENST00000532285 FOSP01100 380 aaPredicted RBP26.34■■□□□ 1.81
CAPN1-222ENST00000532285 SUPT20HL2P0C7V6 817 aa26.34■■□□□ 1.81
CAPN1-222ENST00000532285 FPGSQ05932 587 aa26.34■■□□□ 1.81
CAPN1-222ENST00000532285 PTPN11Q06124 597 aaPredicted RBP26.34■■□□□ 1.81
CAPN1-222ENST00000532285 NEDD9Q14511 834 aa26.34■■□□□ 1.81
CAPN1-222ENST00000532285 NTRK3Q16288 839 aa26.34■■□□□ 1.81
CAPN1-222ENST00000532285 PPFIA4O75335 1185 aa26.33■■□□□ 1.81
CAPN1-222ENST00000532285 HOXD8P13378 290 aaPredicted RBP26.33■■□□□ 1.81
CAPN1-222ENST00000532285 IFNAR1P17181 557 aa26.33■■□□□ 1.81
CAPN1-222ENST00000532285 FAM47CQ5HY64 1035 aa26.33■■□□□ 1.81
CAPN1-222ENST00000532285 MFSD5Q6N075 450 aa26.33■■□□□ 1.81
CAPN1-222ENST00000532285 CCDC12Q8WUD4 166 aaPredicted RBP26.33■■□□□ 1.81
CAPN1-222ENST00000532285 PHKBQ93100 1093 aa26.33■■□□□ 1.81
CAPN1-222ENST00000532285 RNF26Q9BY78 433 aaPredicted RBP26.33■■□□□ 1.81
CAPN1-222ENST00000532285 NCOA5Q9HCD5 579 aaKnown RBP26.33■■□□□ 1.81
CAPN1-222ENST00000532285 SORBS3O60504 671 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 SEMA3FQ13275 785 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 PKN1Q16512 942 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 HSDL1Q3SXM5 330 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 KAT2BQ92831 832 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 GPRASP2Q96D09 838 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 CDHR1Q96JP9 859 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 SENP7Q9BQF6 1050 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 KATNAL1Q9BW62 490 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 PPP1R12CQ9BZL4 782 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 HIPK3Q9H422 1215 aa26.32■■□□□ 1.8
CAPN1-222ENST00000532285 CHMP4BP1P59074 171 aa26.31■■□□□ 1.8
CAPN1-222ENST00000532285 TMEM199Q8N511 208 aa26.31■■□□□ 1.8
CAPN1-222ENST00000532285 TRMT13Q9NUP7 481 aaKnown RBP26.31■■□□□ 1.8
CAPN1-222ENST00000532285 ESYT2A0FGR8 921 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 SOX1O00570 391 aaPredicted RBP26.3■■□□□ 1.8
CAPN1-222ENST00000532285 CLK2P49760 499 aaKnown RBP26.3■■□□□ 1.8
CAPN1-222ENST00000532285 AP3B2Q13367 1082 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 PPIGQ13427 754 aaKnown RBP eCLIP26.3■■□□□ 1.83e-6■□□□□ 9.5
CAPN1-222ENST00000532285 SHHQ15465 462 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 METTL7BQ6UX53 244 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 GIMAP8Q8ND71 665 aaPredicted RBP26.3■■□□□ 1.8
CAPN1-222ENST00000532285 IL17RAQ96F46 866 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 LARP6Q9BRS8 491 aaKnown RBP26.3■■□□□ 1.8
CAPN1-222ENST00000532285 NOC4LQ9BVI4 516 aaKnown RBP26.3■■□□□ 1.8
CAPN1-222ENST00000532285 SLC26A6Q9BXS9 759 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 ZMYND12Q9H0C1 365 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 UBIAD1Q9Y5Z9 338 aa26.3■■□□□ 1.8
CAPN1-222ENST00000532285 SZT2Q5T011 3432 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 ITGB5P18084 799 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 CYP2C18P33260 490 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 PSEN2P49810 448 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 C9orf50Q5SZB4 431 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 CYFIP1Q7L576 1253 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 SESTD1Q86VW0 696 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 TRIM22Q8IYM9 498 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 BCAS3Q9H6U6 928 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 C6orf50Q9HD87 102 aa26.29■■□□□ 1.8
CAPN1-222ENST00000532285 LAMA2P24043 3122 aaKnown RBP26.29■■□□□ 1.8
CAPN1-222ENST00000532285 NOP56O00567 594 aaKnown RBP26.28■■□□□ 1.8
CAPN1-222ENST00000532285 CPLX1O14810 134 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 MAFGO15525 162 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 F2P00734 622 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 ZNF286BP0CG31 522 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 EPHB4P54760 987 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 SSRP1Q08945 709 aaKnown RBP26.28■■□□□ 1.8
CAPN1-222ENST00000532285 MCTP2Q6DN12 878 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 PPP1R13LQ8WUF5 828 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 ANO3Q9BYT9 981 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 JADE2Q9NQC1 790 aa26.28■■□□□ 1.8
CAPN1-222ENST00000532285 HAS3O00219 553 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 PPFIA3O75145 1194 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 SEC24BO95487 1268 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 GNA11P29992 359 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 STK3Q13188 491 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 MTMR1Q13613 665 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 MFSD10Q14728 455 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 ANKRD1Q15327 319 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 CPLX2Q6PUV4 134 aaKnown RBP26.27■■□□□ 1.8
CAPN1-222ENST00000532285 LRCH3Q96II8 777 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 TMEM260Q9NX78 707 aa26.27■■□□□ 1.8
CAPN1-222ENST00000532285 TRIP12Q14669 1992 aaPredicted RBP26.27■■□□□ 1.8
CAPN1-222ENST00000532285 CYP2C9P11712 490 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 CSF2RAP15509 400 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 KIAA0753Q2KHM9 967 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms