RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MCTP2Q6DN12 878 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 BORAQ6PGQ7 559 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 CPLX3Q8WVH0 158 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 EMC9Q9Y3B6 208 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 MRVI1Q9Y6F6 885 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 C22orf46C9J442 243 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 CLSTN1O94985 981 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 FPR2P25090 351 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 RAB33AQ14088 237 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 INF2Q27J81 1249 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 PRR31Q5SQ13 230 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 VHLLQ6RSH7 139 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 FAM124AQ86V42 546 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 ZC3H18Q86VM9 953 aaKnown RBP6.34□□□□□ -1.39
USP47-211ENST00000531513 TXNDC5Q8NBS9 432 aaKnown RBP6.34□□□□□ -1.39
USP47-211ENST00000531513 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 ST6GALNAC2Q9UJ37 374 aa6.34□□□□□ -1.39
USP47-211ENST00000531513 MRPL42Q9Y6G3 142 aaKnown RBP6.34□□□□□ -1.39
USP47-211ENST00000531513 ZNF536O15090 1300 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 STAT5AP42229 794 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 SLC6A11P48066 632 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 FAM126BQ8IXS8 530 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
USP47-211ENST00000531513 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.4
USP47-211ENST00000531513 U2SURPO15042 1029 aaKnown RBP6.32□□□□□ -1.4
USP47-211ENST00000531513 GTF2IRD2BQ6EKJ0 949 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 GTF2IRD2Q86UP8 949 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 TRIM59Q8IWR1 403 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 CRACR2BQ8N4Y2 399 aaPredicted RBP6.32□□□□□ -1.4
USP47-211ENST00000531513 SLC16A11Q8NCK7 471 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 BVESQ8NE79 360 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 CHST13Q8NET6 341 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 NPLOC4Q8TAT6 608 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 FRS2Q8WU20 508 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 DVL3Q92997 716 aaPredicted RBP6.32□□□□□ -1.4
USP47-211ENST00000531513 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 SRPK1Q96SB4 655 aaKnown RBP6.32□□□□□ -1.4
USP47-211ENST00000531513 LGR4Q9BXB1 951 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 SRRDQ9UH36 339 aa6.32□□□□□ -1.4
USP47-211ENST00000531513 FSHBP01225 129 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 KRTAP1-1Q07627 177 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 ADAM9Q13443 819 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 CR1LQ2VPA4 569 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 GLB1LQ6UWU2 654 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 MILR1Q7Z6M3 343 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 NLRP10Q86W26 655 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 HNRNPLLQ8WVV9 542 aaKnown RBP6.31□□□□□ -1.4
USP47-211ENST00000531513 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
USP47-211ENST00000531513 APBA2Q99767 749 aa6.31□□□□□ -1.4
USP47-211ENST00000531513 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
USP47-211ENST00000531513 ENPP3O14638 875 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 B4GALT3O60512 393 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 ZNF28P17035 718 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 ZNF143P52747 638 aaPredicted RBP6.3□□□□□ -1.4
USP47-211ENST00000531513 RPL11P62913 178 aaKnown RBP6.3□□□□□ -1.4
USP47-211ENST00000531513 MROH9Q5TGP6 573 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 Q8N1Y9 231 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 LCORQ96JN0 433 aaPredicted RBP6.3□□□□□ -1.4
USP47-211ENST00000531513 MRGPRX3Q96LB0 322 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 NKX2-4Q9H2Z4 354 aa6.3□□□□□ -1.4
USP47-211ENST00000531513 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
USP47-211ENST00000531513 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
USP47-211ENST00000531513 LAMTOR5O43504 91 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 NAT2P11245 290 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 C6P13671 934 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 NCAPHQ15003 741 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 CDSNQ15517 529 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 PTPROQ16827 1216 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 TNNI3KQ59H18 835 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 SPRED1Q7Z699 444 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 PPP1R14AQ96A00 147 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 SCAND2PQ9GZW5 306 aaPredicted RBP6.29□□□□□ -1.4
USP47-211ENST00000531513 CYP26B1Q9NR63 512 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 SNTG2Q9NY99 539 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 TIMM13Q9Y5L4 95 aaPredicted RBP6.29□□□□□ -1.4
USP47-211ENST00000531513 X6R8D5 127 aa6.29□□□□□ -1.4
USP47-211ENST00000531513 FAM221BA6H8Z2 402 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 SUV39H1O43463 412 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 TACR2P21452 398 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 NKX3-2P78367 333 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 RASA3Q14644 834 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 SH3RF3Q8TEJ3 882 aaPredicted RBP6.28□□□□□ -1.4
USP47-211ENST00000531513 BTN2A2Q8WVV5 523 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 KISS1RQ969F8 398 aaPredicted RBP6.28□□□□□ -1.4
USP47-211ENST00000531513 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 CCDC113Q9H0I3 377 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms